Gene Rpal_3107 details

Gene Information

• Locus tag: Rpal_3107
• Symbol: rpsI
• ID: 6410778
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodopseudomonas palustris TIE-1
• Kingdom: Bacteria
• Replicon accession: NC_011004
• Strand: +
• Start bp: 3350688
• End bp: 3351170
• Gene Length: 483 bp
• Protein Length: 160 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 642712987
• Product: 30S ribosomal protein S9
• Protein accession: YP_001992088
• Protein GI: 192291483
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0103] Ribosomal protein S9

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 0.966484
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCGAGA CCATGCAGTC TCTCGACCAG CTCGCCGCGC TGAAGACCAC CGTCACTGGT 
GCGGACGCGC CGACCTACAC CAAGAAGGTC GACAAGTTCG GTCGCGCCTA CGCCACCGGC 
AAGCGCAAGG ACGCGGTCGC CCGCGTCTGG ATCAAGCCGG GCGCCGGCAA GATCACCGTC 
AACAGCCGTG AGGTCGAAAC CTATTTCGCC CGTCCGGTGC TGCGCATGAT GATCCAGCAG 
CCGCTGGTCG CCGCGGCCCG TGCCGGCCAG TACGACGTGA TCTGCACCGT CGCCGGCGGC 
GGTCTGTCCG GCCAGGCCGG TGCAGTTCGT CACGGCATCT CCAAGGCGCT CACCAATTTC 
GAGCCGGAGC TGCGCAGCGT GCTGAAGAAG GGTGGCTTCC TGACCCGCGA CAGCCGCGTC 
GTCGAGCGTA AGAAGTACGG CAAGGCCAAG GCCCGCCGCT CCTTCCAGTT CTCGAAGCGC 
TAA 

 

Protein sequence

MSETMQSLDQ LAALKTTVTG ADAPTYTKKV DKFGRAYATG KRKDAVARVW IKPGAGKITV 
NSREVETYFA RPVLRMMIQQ PLVAAARAGQ YDVICTVAGG GLSGQAGAVR HGISKALTNF 
EPELRSVLKK GGFLTRDSRV VERKKYGKAK ARRSFQFSKR