| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3091 |
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| Symbol | |
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| ID | 6410762 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 3334834 |
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| End bp | 3337188 |
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| Gene Length | 2355 bp |
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| Protein Length | 784 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642712971 |
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| Product | lipopolysaccharide biosynthesis protein |
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| Protein accession | YP_001992072 |
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| Protein GI | 192291467 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0489] ATPases involved in chromosome partitioning
[COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00715976 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGGATCG CGTTCTGGCG CCGGAACACC CACGATACGG TAAAGGCATC AGCCCCATCA
CGCGAATCCT CAACCGCTTC AACTTCAGCG GTCGCAGCTA AATCCGTCGC GGCTCCCGCA
CAGAAGCCCG CGATTCGTCA GGCAATCTTC AAGCGCACTC CGACGCGCAC CGTTCCGATC
GAAAAGCCGG CACCGCTGCC GCCGGACGGC GATATCGACG TGCGGCTGAT CGGGCAGGCA
CTCGCCCGCA AGAAGCATCT GATCATCGCG CCGACGCTCC TCGCGCTGGT CGTCTCGCTG
GCGATCGTCA ATCTGATTAC GCCGCGCTAC AAGTCCGAAG CCCGCATCCT GATCGATGGC
CGCGAAAACA CCTTCCTGCG CCCGAGCGGC GACCGGGACG ATCAGCGCAG CGGCCCAGAT
CCTGAGGCGG TGACCAGCCA GGTTCAACTC CTGCTGTCGC GCCAGCTCGC CCTTGAGGTC
ATCAAGAAGA ACAAGCTCGC CGAACGGCCG GAATTCGATC CGGTGCTGAA AGGAATCAAT
CCGATCAAGT CGTTGTTGGC GCTGATCGGT ATCGGCCGCG ATCCGTTTGC GATGACGCCG
GAAGAACGCG TGCTCAACGC TTACTACGAG CGCCTGACCG CATACGCGGT CGACAAGTCG
CGTGTGATGG TGATCGAATT CCAGTCCGAA GACCCCGAGC TCGCAGCCCG CGTCTCCAAT
TCGATCGCGG ACGGCTATCT GGTGCTGCTG CAGAACGCGC GTCAGGCACA GGCCAAGTCG
GCCGGGCAGT GGCTGTCCGG AGAAATCGAG TCGCTGCGCA AGAAGGTTTC GGAGGCCGAA
GACAAGGTTG AGGATTTCCG CTCCAAGTCG AGCCTGTTCA TCGGCAACAA CAATACCACG
CTGTCGAACC AGCAGCTCGG CGACATCAAC GCCCAGCTCG CCAACGCGCG TGCTCTGAAG
TCCGATGCCG AAGCCAAGGC GAGGCTGATC AAGGAGATGC TGAAGAGTGG CGGCCCGATC
GAAGCTTCTG AAGTGCTCAA CTCCGAACTG ATCCGTCGGC TGTCGGAGCA GCGGGTGACG
CTCCGCGCGC AACTCGCCGA GCAGAGCTCG ACGCTGCTCG GCGGTCATCC GCGGATCAAG
GAATTGAAGG CGCAGCTGTC CGATCTCGAT CAACAGCTCC GCGACGAAGC TGTAAAGCTG
TCGCGCTCGT TCGAGAACGA TGCACGGATC GCCAGCAGCC GGGTGGAGAA CCTGTCGGCC
AGCCTCGATC AGTTGAAGAA GCAGGCCTCG GCCACCAACG GCCAGGACGT GCAGCTCCGT
GCCCTGGAGC GCGAGGCCAA GGCGCAGCGC GACCTGCTGG AATCCTATCT GGCGAAGTAT
CGTGAAGCGA CGACGCGCGA GACGATCGAC CAATCGCCGT CGGACGGCCG CATCATCTCA
CGCGCGATCG TCTCCAACAC GCCTGACTAT CCGAAAAAGC TGCCGATCGT GCTGATTGCC
ACGCTGGCGA CGCTGCTGCT GACCTCGGGC AGCATCGCAA CCGGCGAATT GCTGCGGATG
ACTCAGCCGC GCGGCCGCGA GGTCGCTACG CCTGCAGTCG TCGAACCCGA TCTGGTGCCC
GTTGCGGCTG CTGCTCCCGT GGTGCAGCCG GCACCGGCGG CTCCGCCGAC CTTTGCAGCG
CAGCCCGCGC CAGCGCCGAT CGTCGAGCCG GCTCCGATCG AGACTGCGCC GGTTGCGGCG
CCTGCCGCAG CTCCGGTGGG TGAAATCGAG GCGCTGGCAC ACCGTCTGCG CACGGCCGGT
GAGGGCGGGC GGAAACTCAC CGTGCTGGGG ACGGGCGACA CTGACTCGGT CACGACGACG
GCGCTGGTGC TGGCTCGCCG GCTTGCCCAG GATACCAAGG TGGTGCTGAT CGACCTGTCG
GAATCCTCCG CGATGCTGAA GGCCGCGTCG ATTGATCCGT CGGCGCCCGG CCTTGCTGAA
CTGATGCTGG GTGAGGCGGC GTTCGGCCAG ATCATCACCC GGGACCGCTC GTCGTCGCTG
CAATTGGTCA GCGCCGGCAA GCCCGGCTTC GACCGGATGC TGCTGCATTC GCCGCGGCTG
TCGCTGGCGA TCGACGCGCT GATGCGGGTG TATGACCACG TGCTGCTTGA CGCCGGCACT
GCATCCGACC TGCCGGCAGA GTTGCTGACG TCACAGGCTC AGGCTGCTGT CGTGCCGGCG
CCGACGATGA CCAGCGAAGC GCGCGCCAAG ATGGCCGAGC AACTCGTCGC GGTCGGCTTC
TCCGAGGTAA CGATGCTGCG CGCTGCCGAA CCGATCGATC CGATCGTTCC GGGACAACGC
TCCGCAGCGG CGTAG
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| Protein sequence | MRIAFWRRNT HDTVKASAPS RESSTASTSA VAAKSVAAPA QKPAIRQAIF KRTPTRTVPI
EKPAPLPPDG DIDVRLIGQA LARKKHLIIA PTLLALVVSL AIVNLITPRY KSEARILIDG
RENTFLRPSG DRDDQRSGPD PEAVTSQVQL LLSRQLALEV IKKNKLAERP EFDPVLKGIN
PIKSLLALIG IGRDPFAMTP EERVLNAYYE RLTAYAVDKS RVMVIEFQSE DPELAARVSN
SIADGYLVLL QNARQAQAKS AGQWLSGEIE SLRKKVSEAE DKVEDFRSKS SLFIGNNNTT
LSNQQLGDIN AQLANARALK SDAEAKARLI KEMLKSGGPI EASEVLNSEL IRRLSEQRVT
LRAQLAEQSS TLLGGHPRIK ELKAQLSDLD QQLRDEAVKL SRSFENDARI ASSRVENLSA
SLDQLKKQAS ATNGQDVQLR ALEREAKAQR DLLESYLAKY REATTRETID QSPSDGRIIS
RAIVSNTPDY PKKLPIVLIA TLATLLLTSG SIATGELLRM TQPRGREVAT PAVVEPDLVP
VAAAAPVVQP APAAPPTFAA QPAPAPIVEP APIETAPVAA PAAAPVGEIE ALAHRLRTAG
EGGRKLTVLG TGDTDSVTTT ALVLARRLAQ DTKVVLIDLS ESSAMLKAAS IDPSAPGLAE
LMLGEAAFGQ IITRDRSSSL QLVSAGKPGF DRMLLHSPRL SLAIDALMRV YDHVLLDAGT
ASDLPAELLT SQAQAAVVPA PTMTSEARAK MAEQLVAVGF SEVTMLRAAE PIDPIVPGQR
SAAA
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