Gene Rpal_3044 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_3044 
Symbol 
ID6410715 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp3295393 
End bp3296187 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content59% 
IMG OID642712924 
Productputative phage repressor 
Protein accessionYP_001992025 
Protein GI192291420 
COG category[K] Transcription 
COG ID[COG2932] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGGCAT CAGATAACAT TTGTTATCGG AATGCAAGCA CTAAAGTTAT CGAGACCAGC 
AATAACTGCG GTTATATATT CTCTTGCATG GAACCCGGTA ACATCATCCG CCAAGCGAGA
GAGCAAAAAG GCTGGTCCCA AAAGGATTTG GCGGACCGGG TTGGCATTTC TCAGCCGGCC
ATTCGGAAGA TTGAGGGCGG CTCGACGGTC AAGTCAAAGC ATCTGCCGAA GATTGCGCAG
GTGCTGGGCC TCGATCTGCA GCATCTCGAC GAATCGCTTG ATCAGCTCAC CAACGTGGAG
AGCCAGGCGT TTTCGAGCAC CGGAGATGTG AACCACCACC GACCAGCGTC GGGCATCCTG
GAAATCGACG TGCGCGCCGG CATGGGCGGC GGTGGGAGCG TCGAGGGTCG CGAAGTCGTG
CATAACGGCC GCTACAGCGA CCCGGTGAAA GAGGAAGCAT GGCACTTCCC GGCCCGTTTC
CTTAGGGAAG AATTGCGGGC TCCGGAGAGC CGCGTTCAGA TCCTCGAGAC CCAGGGCGAC
AGCATGGCGC CAACGATCCT TTCGGGCGAT CGGGTTATTA TCGACACCGG CCACCGCCTG
CCCTCTCCCG ATGGGATTTA CGCGATCCGC GACCGGTTTG GCGCGATCGT CGTGAAGCGG
TTGCAGGTGC TACGCCGCGG CGAGCCGCCA ACTATCCGGG TCATCTCCGA CAACAAAGCG
CACGATAGCG AGGACGTCGG GGCCGACGAG ATCCACATTG TCGGTCGCGT GCTTTGGGGC
CTAAAGCGGC TTTGA
 
Protein sequence
MRASDNICYR NASTKVIETS NNCGYIFSCM EPGNIIRQAR EQKGWSQKDL ADRVGISQPA 
IRKIEGGSTV KSKHLPKIAQ VLGLDLQHLD ESLDQLTNVE SQAFSSTGDV NHHRPASGIL
EIDVRAGMGG GGSVEGREVV HNGRYSDPVK EEAWHFPARF LREELRAPES RVQILETQGD
SMAPTILSGD RVIIDTGHRL PSPDGIYAIR DRFGAIVVKR LQVLRRGEPP TIRVISDNKA
HDSEDVGADE IHIVGRVLWG LKRL