Gene Rpal_3022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_3022 
Symbol 
ID6410692 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp3285923 
End bp3286675 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content68% 
IMG OID642712901 
Producttranscriptional regulator, MerR family 
Protein accessionYP_001992003 
Protein GI192291398 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.165787 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGACAAGG CACCCGACGC ATTCCGCACC ATCAGCGAGG TCGCTGCCGA GCTCGACATT 
CCTCAGCACG TGCTGCGCTT CTGGGAGACA CGCTTCACCC AGATCAAGCC GATGAAGCGG
TCCGGCGGGC GGCGCTACTA CCGGCCCGAC GACGTCGACC TGCTCAAGGG CATCCGCCGG
CTGCTGTACG GCGAAGGCTA CACCATCCGC GGTGTGCAGC GGATCCTGAA AGAGCACGGC
ATCAAATCGG TGCAGCGGCT GGCCGACGCC GAGGTCCACG CCAGCTTCGG CGCAGTCGAG
GCGGCAATCA CCCGTAGCGT CACCGAGGAA GAAGAGTTCG AGCCGGTCCC CGGCGGCATC
GACGCCGATG ACGACGATTA CGATGGCGAG GACGAAGGGC TGGATCTGCA CGCAGCGATG
GCCGAGCCGG AGCATCGCGG CGCGCCGGCT GCCGCGCCCC GACGCAACAT CACGGCTGAG
CCGCGCCACG CTCCGCATTT CGACGATCAC GAGGACGACG GTCACGACGA CGACTTCGCC
GTCGAGCCGA CTCCTGTCAT CGCAGCTCCC GGCCGCGCCC CGCGGTTCGA TCTGCCGCCG
CTGGAGTTCC CAGCCGCCAA GGCGCCGCCG GCACCGCCGC CGGTCGATCT CGGACCGCTC
CGCGCCGTGC TGACCGACCT GATCGCCTGC CGCGAATTGC TCGACGCCGC GATCAAGGAT
GGCCGAGGGC AGGCGGAAAG TCCTGAGCAA TAG
 
Protein sequence
MDKAPDAFRT ISEVAAELDI PQHVLRFWET RFTQIKPMKR SGGRRYYRPD DVDLLKGIRR 
LLYGEGYTIR GVQRILKEHG IKSVQRLADA EVHASFGAVE AAITRSVTEE EEFEPVPGGI
DADDDDYDGE DEGLDLHAAM AEPEHRGAPA AAPRRNITAE PRHAPHFDDH EDDGHDDDFA
VEPTPVIAAP GRAPRFDLPP LEFPAAKAPP APPPVDLGPL RAVLTDLIAC RELLDAAIKD
GRGQAESPEQ