Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_3022 |
Symbol | |
ID | 6410692 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 3285923 |
End bp | 3286675 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642712901 |
Product | transcriptional regulator, MerR family |
Protein accession | YP_001992003 |
Protein GI | 192291398 |
COG category | [K] Transcription |
COG ID | [COG0789] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.165787 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGACAAGG CACCCGACGC ATTCCGCACC ATCAGCGAGG TCGCTGCCGA GCTCGACATT CCTCAGCACG TGCTGCGCTT CTGGGAGACA CGCTTCACCC AGATCAAGCC GATGAAGCGG TCCGGCGGGC GGCGCTACTA CCGGCCCGAC GACGTCGACC TGCTCAAGGG CATCCGCCGG CTGCTGTACG GCGAAGGCTA CACCATCCGC GGTGTGCAGC GGATCCTGAA AGAGCACGGC ATCAAATCGG TGCAGCGGCT GGCCGACGCC GAGGTCCACG CCAGCTTCGG CGCAGTCGAG GCGGCAATCA CCCGTAGCGT CACCGAGGAA GAAGAGTTCG AGCCGGTCCC CGGCGGCATC GACGCCGATG ACGACGATTA CGATGGCGAG GACGAAGGGC TGGATCTGCA CGCAGCGATG GCCGAGCCGG AGCATCGCGG CGCGCCGGCT GCCGCGCCCC GACGCAACAT CACGGCTGAG CCGCGCCACG CTCCGCATTT CGACGATCAC GAGGACGACG GTCACGACGA CGACTTCGCC GTCGAGCCGA CTCCTGTCAT CGCAGCTCCC GGCCGCGCCC CGCGGTTCGA TCTGCCGCCG CTGGAGTTCC CAGCCGCCAA GGCGCCGCCG GCACCGCCGC CGGTCGATCT CGGACCGCTC CGCGCCGTGC TGACCGACCT GATCGCCTGC CGCGAATTGC TCGACGCCGC GATCAAGGAT GGCCGAGGGC AGGCGGAAAG TCCTGAGCAA TAG
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Protein sequence | MDKAPDAFRT ISEVAAELDI PQHVLRFWET RFTQIKPMKR SGGRRYYRPD DVDLLKGIRR LLYGEGYTIR GVQRILKEHG IKSVQRLADA EVHASFGAVE AAITRSVTEE EEFEPVPGGI DADDDDYDGE DEGLDLHAAM AEPEHRGAPA AAPRRNITAE PRHAPHFDDH EDDGHDDDFA VEPTPVIAAP GRAPRFDLPP LEFPAAKAPP APPPVDLGPL RAVLTDLIAC RELLDAAIKD GRGQAESPEQ
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