Gene Rpal_3010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_3010 
Symbol 
ID6410680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand+ 
Start bp3275433 
End bp3276176 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content61% 
IMG OID642712889 
Producthypothetical protein 
Protein accessionYP_001991991 
Protein GI192291386 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.393744 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGGGCT TCCTCGTTTC TCTATCACTT GTGATCTTCG GCCTTGTTTC CGTCTTTGCG 
ATTGGAGCGG TCACGTCGCT CTACTTCGCT CTCGCCCCAC CAGAACTGCC AACACCGCCA 
GATGTGAGTT TTCTTGCGTC GGACGCCCAC TTCATGGTCG GCGGGCAGCA TCTGATCGTG 
CCGGCGGTGG CGCTGAGTCG GTTTCACTGC GTCGAGTGCC TCGAGCCGCA TCGGCTCGAG 
AAGTCGAAGG CTTACCTTCA AGAGGCGAGC GATCCCGCCA AGCCTATGCC AGCGCGGATT 
TTGGACGTTT CGATCCTTCG ATATCGGGAC ATCACTGAGC GGAGTTCCAC GCCCGATATT 
TGCCCGCTGC TGACGCGACA ATGGTCAAAG GCGGTCTGCC GCGGTCAGAC CAAGGGGATT 
CTCGGCCGAT TGCCGCAGTC GATCAATCTT CGGGACCGCA CCCTTGGCAA GAAGACTACT 
TCTGGCGTGG AGCAGGGCGC AGATCGGCGT AACGATGGGA TGCGTCCCGT CGCAGCCGAG 
GTTCACTGCG ATGTCGACGC CAAGTCTTGC GATGCCAGAA TCGAGGCTCT TCCGGGACTT 
CTGGCGGTGT GGACGGTCTG GAACGATGAA CGCACTGGCA CCACGGCCTC GGAGATGGCC 
GACAGGCAAG GCCTCGCCAT CGTCGAGTTC GTCCGGCGGG CTATCGGTCC GGTCGAGGAC 
GCCACCTTGT TGCAAGCGGA GTGA
 
Protein sequence
MMGFLVSLSL VIFGLVSVFA IGAVTSLYFA LAPPELPTPP DVSFLASDAH FMVGGQHLIV 
PAVALSRFHC VECLEPHRLE KSKAYLQEAS DPAKPMPARI LDVSILRYRD ITERSSTPDI 
CPLLTRQWSK AVCRGQTKGI LGRLPQSINL RDRTLGKKTT SGVEQGADRR NDGMRPVAAE 
VHCDVDAKSC DARIEALPGL LAVWTVWNDE RTGTTASEMA DRQGLAIVEF VRRAIGPVED 
ATLLQAE