Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_2967 |
Symbol | |
ID | 6410637 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 3237516 |
End bp | 3237908 |
Gene Length | 393 bp |
Protein Length | 130 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642712848 |
Product | DNA-directed RNA polymerase subunit omega |
Protein accession | YP_001991950 |
Protein GI | 192291345 |
COG category | [K] Transcription |
COG ID | [COG1758] DNA-directed RNA polymerase, subunit K/omega |
TIGRFAM ID | [TIGR00690] DNA-directed RNA polymerase, omega subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.183581 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGCGCG TCACCGTGGA AGATTGCATT GACAAGGTCG ACAACCGGTT CGACCTCGTC CTGTTGGCCG CTCATCGCGC CCGCATGATC TCGTCCGGCT CGCCGCTCAC GATCGATCGC GACAACGACA AGAATCCCGT TGTTTCGCTT CGCGAAATTG CGGATCAGAC GATTTCGCCG GAAGACCTCA AGGAAGAACT GGTGCATTCG CTGCAGAAGT TCGTTGAGGT CGATGAGCCG GAACCGGATA CCGTTCCGCT GATTGGTTCG GCCGGCGCCA GCGTCGATGC GGACGATACC GAAGTGGCGA TGGAGCGGAT GACCGAGGAA GAGCTGCTCA AGGGTCTGGA GGGCTTGGCG CCCCCGGAAG AGCAGCCCGA GGAAGACGAA TAA
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Protein sequence | MARVTVEDCI DKVDNRFDLV LLAAHRARMI SSGSPLTIDR DNDKNPVVSL REIADQTISP EDLKEELVHS LQKFVEVDEP EPDTVPLIGS AGASVDADDT EVAMERMTEE ELLKGLEGLA PPEEQPEEDE
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