Gene Rpal_2967 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_2967 
Symbol 
ID6410637 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp3237516 
End bp3237908 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content60% 
IMG OID642712848 
ProductDNA-directed RNA polymerase subunit omega 
Protein accessionYP_001991950 
Protein GI192291345 
COG category[K] Transcription 
COG ID[COG1758] DNA-directed RNA polymerase, subunit K/omega 
TIGRFAM ID[TIGR00690] DNA-directed RNA polymerase, omega subunit 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.183581 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCGCG TCACCGTGGA AGATTGCATT GACAAGGTCG ACAACCGGTT CGACCTCGTC 
CTGTTGGCCG CTCATCGCGC CCGCATGATC TCGTCCGGCT CGCCGCTCAC GATCGATCGC
GACAACGACA AGAATCCCGT TGTTTCGCTT CGCGAAATTG CGGATCAGAC GATTTCGCCG
GAAGACCTCA AGGAAGAACT GGTGCATTCG CTGCAGAAGT TCGTTGAGGT CGATGAGCCG
GAACCGGATA CCGTTCCGCT GATTGGTTCG GCCGGCGCCA GCGTCGATGC GGACGATACC
GAAGTGGCGA TGGAGCGGAT GACCGAGGAA GAGCTGCTCA AGGGTCTGGA GGGCTTGGCG
CCCCCGGAAG AGCAGCCCGA GGAAGACGAA TAA
 
Protein sequence
MARVTVEDCI DKVDNRFDLV LLAAHRARMI SSGSPLTIDR DNDKNPVVSL REIADQTISP 
EDLKEELVHS LQKFVEVDEP EPDTVPLIGS AGASVDADDT EVAMERMTEE ELLKGLEGLA
PPEEQPEEDE