Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_2961 |
Symbol | |
ID | 6410631 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 3233234 |
End bp | 3234124 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642712842 |
Product | dihydrodipicolinate synthase |
Protein accession | YP_001991944 |
Protein GI | 192291339 |
COG category | [E] Amino acid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGCCA AGACGAAATT TCGGGGGTCG TTTACCGCCT TGGTCACGCC GTTCAAAAAT GGCGCCCTCG ACGAGCAGGC GTTTCGCAGC CTGGTGAACT GGCAGATCGA GCAGGGCACC CACGGTCTGG TGCCGGTCGG AACCACCGGC GAAAGCCCGA CGCTGAGCCA CGAGGAACAC CACAAGGTGG TGGAGTGGTG CATCGCGGAG GCCAAGGGCC GCGTGCCGGT GATCGCCGGC GCCGGTTCCA ACTCGACCCG CGAAGCCGTC GAGCTTGCGC GCCACGCCGA GAAGGCGGGC GCCGATGCGG TGCTGGTGGT GACGCCGTAC TACAACAAGC CGACCCAGGA AGGCATGTAT CAGCACTTCA AGGCGGTGAA CGATGCGATC GGGATTCCGA TCATCATCTA CAACATTCCG CCGCGCTCGG TCGTCGACAT GTCGGTCGAC ACCATGAGCC GGCTGTACGA GCTCGACAAC ATCGTCGGCG TGAAGGACGC GACCGCCAAT CTCGGCCGGG TGTCGCAGCA GCGCCACGCG ATGGGCCCGG ACTTCATCCA GCTCTCCGGC GAGGACATGA CCGCGCTGGC CTATATGGCG GCCGGCGGCC ATGGCTGCAT CTCGGTGGTG TCGAACATCG CGCCGAAGTT GTGTTCGGAC CTGATGGGCG CGGTGTTCGC GGGCGACTAT CCTGGCGCGC TGAAGATCCA GGATCGCCTG GTGCCGCTGC ACGACGCGGT GTTCAAGGAG CCGGGCGTCG CCGGTGCCAA GCATGGCCTG ACGCTGCTCG GCCGTATTCA GGAAGAGGTC CGGCTGCCGC TGATGACGGT GACCGAACCG ACCGGCAAGG CGATCCGTGC GGCGATGGTG CACGCAGGAG TGATCAACTG A
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Protein sequence | MAAKTKFRGS FTALVTPFKN GALDEQAFRS LVNWQIEQGT HGLVPVGTTG ESPTLSHEEH HKVVEWCIAE AKGRVPVIAG AGSNSTREAV ELARHAEKAG ADAVLVVTPY YNKPTQEGMY QHFKAVNDAI GIPIIIYNIP PRSVVDMSVD TMSRLYELDN IVGVKDATAN LGRVSQQRHA MGPDFIQLSG EDMTALAYMA AGGHGCISVV SNIAPKLCSD LMGAVFAGDY PGALKIQDRL VPLHDAVFKE PGVAGAKHGL TLLGRIQEEV RLPLMTVTEP TGKAIRAAMV HAGVIN
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