Gene Rpal_2959 details

Gene Information

• Locus tag: Rpal_2959
• ID: 6410629
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodopseudomonas palustris TIE-1
• Kingdom: Bacteria
• Replicon accession: NC_011004
• Strand: +
• Start bp: 3231969
• End bp: 3232682
• Gene Length: 714 bp
• Protein Length: 237 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 642712840
• Product: hypothetical protein
• Protein accession: YP_001991942
• Protein GI: 192291337
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0684] Demethylmenaquinone methyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 30
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCACTGA CCCCGGAAGC CATCGACATC CTGTCGCGCG TTTCGACCGC GACCATCACC 
ACGGTGCTGC TGAAGAAGGG GCTCCGCAAC GTCTGGATTC GCGGCGCGCG GCCGCTGCGG 
CCGGGTGCGA CGCGGTTGGT CGGCGAGGCG TTCACGCTGC GCTTCGTGCC GGCGCGCGAG 
GATCTGGCAA CGCCCGAGTC CTGGGCCTCG CCGATCTCGA CTCGTGCGGC AATCGAGGCG 
ATGCCGGAAG GCTGCATCGC CGTGGTCGAC GCCATGGGCA TCAAGGACGC CGGCATCTTC 
GGCGACATCC TGTGCGCCCG CATGGTCAAG CGCGGCATCA CGGCGCTGAT CACCGACGGC 
GTCGTGCGCG ACCTCGAGGG CGTGCTCGGC ACCGGCCTGC CGGTGTGGTG TGACGGCGCG 
GCTGCGCCGC CGTCGGTGGC CGGCCTGACC TTCGTCGGCT GGGACCAGCC GATCGGCTGC 
GGCGGCGTCG CGGTGTTCCC GAGGGACATC ATCGTCGCCG ACCAGGACGG TGCGGTGCTG 
ATCCCGCAGG CGCTGCTCGA CCATGTGCTT GCCGAGGGGC CGGAGCAGGA GCGGATGGAA 
GGCTGGATCG TCGAGGAGGT CAACAACGGC GCCGTGCTGC CCGGCCTGTA TCCGATGAAC 
GCCGAAACCA AGGCACGCTA CGCCGCGTTC AAGGAGAAGG CCGACAAAAC CTAA 

 

Protein sequence

MSLTPEAIDI LSRVSTATIT TVLLKKGLRN VWIRGARPLR PGATRLVGEA FTLRFVPARE 
DLATPESWAS PISTRAAIEA MPEGCIAVVD AMGIKDAGIF GDILCARMVK RGITALITDG 
VVRDLEGVLG TGLPVWCDGA AAPPSVAGLT FVGWDQPIGC GGVAVFPRDI IVADQDGAVL 
IPQALLDHVL AEGPEQERME GWIVEEVNNG AVLPGLYPMN AETKARYAAF KEKADKT