| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2895 |
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| Symbol | |
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| ID | 6410564 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 3157528 |
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| End bp | 3158502 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642712775 |
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| Product | aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein |
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| Protein accession | YP_001991878 |
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| Protein GI | 192291273 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.528553 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGACCC TATCCCGGCG CCTGATGACC AGTCTGGTCC TGGCAACAAT GCTGGCGCCG
ACCGCTGTCA TTGCCGCCGA CAAGCCGAAG GAGATCAGGA TCGATTGGGC GACCTACAAT
CCCGTTTCGA TCGTGCTCAA GCAGCAAGGT CTGCTCGAAA AGGAATTCGC GAAGGACGGC
ATCGGCATCG TCTGGGTGCA GTCGGCTGGC TCCAACAAAG CGCTCGAATT CCTCAACGCC
GGCTCGATCG ATTTCGGCTC GACCGCAGGT TCGGCCGCGT TGGTTGCCAA GATCAACGGC
AATCCGATCA AGTCGATCTA TGTCTATTCA CGGCCCGAAT GGACTGCGCT GGTGACCACC
AAGGATTCCA AGATCGCCTC CGTCGCCGAC CTCAAGGGAA AACGCGTGGC GGTGACTCGC
GGCACCGATC CCCATATTTT CCTGGTGCGC GCGTTACTTG GTGCCGGCCT GAGCCAGAAC
GACATCACCC CGGTTCTGCT GCAACACGCC GATGGCAAGG CCGCGCTGAT CCGCGGCGAT
GTCGATGCCT GGGCCGGTCT CGATCCAATG ATGGCGCAAG CCGAAGTCGA GGAAGGCGCG
AAGTTGTTCT ACCGCAAGCC CGAGGCCAAC ACCTGGGGAA TCCTGAACGT CCGCGAGGAC
TTCCTCAAGG AGCATCCGGA TCTGGTTCGG CGCGTGCTCG CCGTCTACGA AGACGCGCGC
AAGTACTCGC TCACTCATTA CGACGAGCTG AAGCAAGCGT TCATTGGCGT CACCAAGCTG
CCCGAGGCCG TGGTCGACAA GCAGCTCAAG GAACGCACCG AACTCACACA TAGCCGGATC
GGCACGCCGC AGCGTGACTC TATTCTCGCC GCCGGACTGG CGCTGCAGCA GGCCGGCGTG
ATCCAGCCGT CGGTCGACGT CAAAGCAGTG CTCGACACGC TGATCGACGA TCAGGTGCCG
CTGCCGACCA ACTAA
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| Protein sequence | MTTLSRRLMT SLVLATMLAP TAVIAADKPK EIRIDWATYN PVSIVLKQQG LLEKEFAKDG
IGIVWVQSAG SNKALEFLNA GSIDFGSTAG SAALVAKING NPIKSIYVYS RPEWTALVTT
KDSKIASVAD LKGKRVAVTR GTDPHIFLVR ALLGAGLSQN DITPVLLQHA DGKAALIRGD
VDAWAGLDPM MAQAEVEEGA KLFYRKPEAN TWGILNVRED FLKEHPDLVR RVLAVYEDAR
KYSLTHYDEL KQAFIGVTKL PEAVVDKQLK ERTELTHSRI GTPQRDSILA AGLALQQAGV
IQPSVDVKAV LDTLIDDQVP LPTN
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