| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2859 |
|---|
| Symbol | |
|---|
| ID | 6410528 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | - |
|---|
| Start bp | 3118394 |
|---|
| End bp | 3119014 |
|---|
| Gene Length | 621 bp |
|---|
| Protein Length | 206 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 642712739 |
|---|
| Product | CinA domain protein |
|---|
| Protein accession | YP_001991842 |
|---|
| Protein GI | 192291237 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1546] Uncharacterized protein (competence- and mitomycin-induced) |
|---|
| TIGRFAM ID | [TIGR00199] competence/damage-inducible protein CinA C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.856791 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAGCA ACGACGCCCG CGCTCTCGCC CGCTCGTTGC TCGACCTCTG CCGTTCGCGC
AAGCTGATGA TCGCGACCGC CGAGTCCTGC ACCGGCGGCT TGGTCGCCGG CGCGCTGACC
GACATTCCCG GCTCGTCGGA CGTCATCGAC CGCGGCTTCG TGACCTATTC CAACGCCGCC
AAGCATGATC TGCTCGGCGT CGAGAACGCC ACGCTCACCA CATTCGGCGC CGTCAGCAAG
GAGACCGCGA TCGCCATGGC GGTCGGGGCG CTGGAGAATG CCGACGTCGA TCTGGCGGTG
TCGATCACCG GCATAGCCGG CCCCGGCGGC GCAACGCCGG GCAAGCCGGT CGGCCTGGTC
CATTTCGCCG TCGCCGCGCG CGACGGCCGC ATCTCGCATC GCGAGCAGCG CTTCGGCGCG
ATCGGCCGCA GCAACGTCCG TCAGCGCTCA GTGGTCGAAG CCCTACGGAT GCTGCTGGAG
GTCGCCCGCG GCCCGAAGCC GCCGACCAAG GCCAAACGCG AAGTGGCCAC CGGCGTGCAC
AAACGCGTCG CCCGCTCGCC TCGCCGCGTC GCCGCCAAAC GCCCGCAGCC GAAGCGGCCG
GTGAAGCCGA AGAAGACTTA A
|
|---|
| Protein sequence | MSSNDARALA RSLLDLCRSR KLMIATAESC TGGLVAGALT DIPGSSDVID RGFVTYSNAA
KHDLLGVENA TLTTFGAVSK ETAIAMAVGA LENADVDLAV SITGIAGPGG ATPGKPVGLV
HFAVAARDGR ISHREQRFGA IGRSNVRQRS VVEALRMLLE VARGPKPPTK AKREVATGVH
KRVARSPRRV AAKRPQPKRP VKPKKT
|
|---|
| |