| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2851 |
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| Symbol | |
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| ID | 6410520 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 3109013 |
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| End bp | 3110404 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642712731 |
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| Product | type I secretion outer membrane protein, TolC family |
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| Protein accession | YP_001991834 |
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| Protein GI | 192291229 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATGGGC TTAAGCGGAT CTCCGGCCTC GCGGCTGCCG GCATCGTTCT GGCGTGTGCG
TCGCAAACAG TGGCCCTGGC CGACACGATG GAAGGTGCGC TGGTCCGCGC TTACCAGACC
AATCCTCAAC TCAATGCGCA GCGCGCTTCG GTGCGCGCCA CCGACGAATC GGTTCCTCAG
GCACTTTCCG GCTATCGGCC CAAGGTCGCC GTCACTGCCA GCGGCGGCTA TCAATACACT
GACGTGATTT CGTCGGTTGC GGGCAGCCAG TTTCATCTGT CCGGCACCCA GATCCCGCGC
TCGGTCGGCG TGACCGCGTC GCAGACCTTG TTCAACGGCA ATCAGACGGC GAACCGCACC
CGTGCGGCCG AGAGCCAGGT GTCGTCGGCG CGTGAAGGTC TGCGGGTGCT CGAGCAGTCG
GTGCTGCTGT CGGCCGCGAC CATCTACATG GACTACCTGC GCGACTCGGC GACGCTCGAA
GTGCAGCGCT CCAACGTGCG CGTGCTCGAG CAGACGTTGC GGCAGACCAA CGACCGCTTC
AACGTCGGCG AGGTCACCCG CACCGACGTG GCGCAGTCGC AGGCGCAGCT TGCCGCCGGC
AACACCCAGC AGCTCGCCGC CGAATCGACG CTGACGACGA CGCGCTCTAA CTACCGCCGC
ATCATCGGCA CCGAGCCGGG CAATCTCGCG CCGGGCTCGC CGGTCGATCG CTATCTTCCG
ACCTCGCTGG CGCAGGCGAT CAACCTCGCG CTGGTCGAGA ATCCGAACGT CACCGCGGCG
ATGTACGGCA TCGACGTCAG CTATCTGAAC GTGAAGATCA ACGAGGGGGC GCTGTTCCCG
ACGCTGACGC TGCAGGCCAG CGCGCAGCAG TCGTGGGAGC CGTCGATCTC GTCGCCGCGT
CAATTCCAGG CTTCGGGCGT CGCGCAGCTG TCGGTCCCGA TCTACCAGGG TGGCGGTGAA
TACGCGCTGA TCCGGCAGTC GAAGGAAACG CTGGCGCAGC AGCGTCTCAA CCTCGAACAG
GTACGCGACC AGACCCGCGC CAGCGTGGTG CAGGCGTGGG GCCAGCTGCA GGCCGCGAAG
GCGCAGGTGT CCTCGGCGCA GTCCCAGGTC AAGGCCTCGG AAATCGCGCT CAACGGTGTG
CGTGAAGAAG CCCGCGCCGG CCAGCGCACC ACGCTCGACG TCTTGAACGC GCAGCAGGCG
CTGGTGAATG CCCGCGTCGC GCTGGTGACC GCGCAGCATG ACCGCGTCGT TGCCTCTTAC
GCGGTGCTGA ACGCGGTCGG CCGGCTGTCG CCGCAAGTGC TCGGCCTGAA GACCGACGTC
TATGATCCCA GCGTGCACTA CCATCAGGTG CGCGACAGCT GGGGCGGCGT GCGGACTCCC
GACGGCCGCT GA
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| Protein sequence | MDGLKRISGL AAAGIVLACA SQTVALADTM EGALVRAYQT NPQLNAQRAS VRATDESVPQ
ALSGYRPKVA VTASGGYQYT DVISSVAGSQ FHLSGTQIPR SVGVTASQTL FNGNQTANRT
RAAESQVSSA REGLRVLEQS VLLSAATIYM DYLRDSATLE VQRSNVRVLE QTLRQTNDRF
NVGEVTRTDV AQSQAQLAAG NTQQLAAEST LTTTRSNYRR IIGTEPGNLA PGSPVDRYLP
TSLAQAINLA LVENPNVTAA MYGIDVSYLN VKINEGALFP TLTLQASAQQ SWEPSISSPR
QFQASGVAQL SVPIYQGGGE YALIRQSKET LAQQRLNLEQ VRDQTRASVV QAWGQLQAAK
AQVSSAQSQV KASEIALNGV REEARAGQRT TLDVLNAQQA LVNARVALVT AQHDRVVASY
AVLNAVGRLS PQVLGLKTDV YDPSVHYHQV RDSWGGVRTP DGR
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