Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_2839 |
Symbol | |
ID | 6410506 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 3091355 |
End bp | 3092200 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642712717 |
Product | protein of unknown function DUF1365 |
Protein accession | YP_001991822 |
Protein GI | 192291217 |
COG category | [S] Function unknown |
COG ID | [COG3496] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.172989 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCGCCC TCGCCGCCAA CACCTCCCCG AGCCCCGGCG CACCGCCCGC AGCGGCCGCG TCGCTGTATG TCGGCGAGGT CATGCATGCG CGGCTGAAGC CGGTTGGACA CCGTTTCCAA TATCGGGTGA TGTCGCTGCT GATTGATCTC GATCGTCTGG ACGAGGCCGA CCGGATGTCG CCGCTGTTCG GCGTCAACAG GCGCGCGCTG TACAGCTTCC ACGAAGCCGA TCACGGCCCG CGCGACGCCT CCTCGCTGCG CGCCTACGCT CAGGCCAGCG CCGCAGCAAA GGGCGTCGAC CTCACAGGCG GCCGGGTGCT GCTGCTGACC TATCCACGGA TTGCCGGCTA CACCTTCAAT CCGCTGTCGG TGTACTTCTG CTACGACGCC TCCGGCGCCC TTGCGGTGGT GATCTACGAA GTCCGCAACA CCTTCGGCGA CATCCATCCT TATGTGCTGC CGGTGCACGC TGGCGAGTTG GGGCCCGCCG GTCTGCGGCA GGAGCAGGAC AAGCTGTTCT ACGTCTCGCC CTTCATCGAG ATGGCGATGC GCTATCACTT CCGCATCGTG CCGCCGGGCG AGATCGTGCG CTTGCGGATT CTCGAAACCG ATTTGGACGG TCCCGTGCTT GCTGCCACCT TTGCAGGCAC ACATCGCGTT TTGTCGACGG CATCGCTGCT ACAGGCTTTC CTCGCGCTGC CGCTGATGAC GTTGAAAGTG ATCGCCGCGA TCCATTGGGA AGCGCTGCGG CTATGGATCA AGGGCGCCAA GCTCGTTCCG CGTCCAGCAC CGCCGTCCCC TCCGACCGGC TTTGCAGCCG GCGGTCACGA TGCTTATACT CACTAA
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Protein sequence | MAALAANTSP SPGAPPAAAA SLYVGEVMHA RLKPVGHRFQ YRVMSLLIDL DRLDEADRMS PLFGVNRRAL YSFHEADHGP RDASSLRAYA QASAAAKGVD LTGGRVLLLT YPRIAGYTFN PLSVYFCYDA SGALAVVIYE VRNTFGDIHP YVLPVHAGEL GPAGLRQEQD KLFYVSPFIE MAMRYHFRIV PPGEIVRLRI LETDLDGPVL AATFAGTHRV LSTASLLQAF LALPLMTLKV IAAIHWEALR LWIKGAKLVP RPAPPSPPTG FAAGGHDAYT H
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