Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_2809 |
Symbol | |
ID | 6410475 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 3052931 |
End bp | 3054943 |
Gene Length | 2013 bp |
Protein Length | 670 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642712687 |
Product | Carbamoyl-phosphate synthase L chain ATP-binding |
Protein accession | YP_001991793 |
Protein GI | 192291188 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
TIGRFAM ID | [TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.978814 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAGCA CCGCCCTGTA TCGTCGCTTC CGCACGCTCC TGATCGCCAA CCGCGGCGAG ATCGCCTGCC GTGTCATCCG CACCGCGCGG GCGATGGGCC TGCGCACCGT CGCGGTGTAT TCCGAGGCCG ATGCCGGCGC GCAGCACGTT GCCGAGGCCG ACGAGGCCGT GTTGCTCGGC CCGGCGCGGG CCCGCGACAG CTACCTCAAT ATCGAACGCA TCATCCAGGC CGCCAAGCAG ACCGGCGCCG AGGCGGTGCA TCCCGGCTAC GGCTTCCTGT CGGAGAGCGC CGAATTCGCG CAGGCCTGCG CCGATGCCGG CCTGGTGTTC GTCGGCCCGA CGCCGGAGAT GATCACCGCG ATGGGCTCCA AATCGGGCTC CAAGGCGCTG ATGGAAAAGG CCGGTGTGCC GCTGGTGCCG GGCTATCACG GCGCGGCGCA GGACGAGGCG ACGCTCGCGG CGGCCGCGGA CAAGATTGGC TTCCCGGTGC TGGTGAAGGC CTCGGCCGGC GGCGGCGGCC GCGGCATGCG GGTGGTGCGC AAGGCCGACG AACTCGCCGC CGCGATCGTC AGCGCCAAGC GCGAGGCCAA GGCGGCGTTT GGGGACGACA CGCTGTTGAT CGAGCGTTAT GTCGACAATC CGCGCCATAT CGAGGTGCAG ATCGTCGGCG ACAGCCATGG CAATCTCGTG TCGCTGTTCG AACGCGAATG CACGCTGCAG CGCCGCCACC AGAAAGTGAT CGAAGAGGCG CCGTCGCCGA CGCTGGATGC GGCTGGCCGC GAAAAAGTCT GCGATGCGGC GCGGCGCGCG GCGGACGCGG TGAACTATGT CGGCGCTGGA ACCATCGAAT TCGTCTCCGA CGGCAAGGAC GTGTTCTTCA TCGAGATGAA CACCCGCCTG CAGGTCGAGC ATCCTGTCAC CGAACTGATC TCCGGCGTCG ACCTGGTTGA ATGGCAGCTC CGCGTCGCGT TCGGCGAAGC GCTGCCGCTG AAGCAGGATC AGCTCAAGCT GAACGGCCAC GCCATCGAGG CGCGGGTGTA TGCCGAGAAC CCGGCGAAGA ACTTCATGCC GTCGGTCGGC AAGATCACGA CCTGGCGCAC GCCGGCTGAG GTCGATGGCC TGCGCATCGA TGCCGGCTAT CGCAGCGGCG ACAGCGTGTC GCCGTATTAC GACGCGATGC TCGCCAAGGT GATCGCGTGG GCGCCGACCC GGCAGGCGGC GATCGACCGG CTCGACCGCG GACTGAACGA GACCGACGTC CGCGGCGTCG TCACCAACAT TCCGTTCCTG TCGGCGCTGG TGACGCATCC CGAGGTGCGC GCCAACGCCA TCGACACCGG TTTCATCGAG CGCCATCTCG CAGCGCTCAC CGCCGCACCG AGCGCGCTCG GCGATCTCGA ACTCGCCGCT GCGGTCGCGG CGATCCTGCG CGGCGAGGAC GAAGCCGCCA AGGCAGAAGG TCCGTCGCCG TGGCGGACCT CTGGCTGGAT GCCGGTCGGC CGGCGCAAGC GCAGCTTCCT GTTCCGTCGC GGGCAGGGGC ATGACCACAC AGATCATACG ATCGAGCTGA CCTATGGCGG CGGATCGTCG GCGCTGACCA TCGACGGCCG CGAGCTTGCC TTCGCGTGGA CCGCCGCTGG CGACGGCATC GATGTGGCAC TCGGCGATGC GCGCTCGCGA ATCCACGCCG TGGTCGACGG TGCCGAGTTG TATGTGCGCA CGCGGAGCGG GAGGTTCGAG CTGCATCTCG TCGATCCGTT CGGCGGCGAA AGCGAGGAGG CCGTCGGCGA AGACAAGATC GTCGCGCCGC TGCCCGGCAC CGTGGTGGCG CTGCTCGCGG AAGCCGGCGC CAAGCTCGAC AAGGGCGCGC CGATCCTCAC GCTCGAAGTG ATGAAGATGG AGCAGACCCT GCGCGCGCCG TTCGCCGGAA CGTTGACGGC GGTGAAATGC AAGGTCGGCG ACATCGTCCA GGAAGGCGCC GAGCTTGCCG AGCTCGAGGC CGACGCAGAC TAA
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Protein sequence | MKSTALYRRF RTLLIANRGE IACRVIRTAR AMGLRTVAVY SEADAGAQHV AEADEAVLLG PARARDSYLN IERIIQAAKQ TGAEAVHPGY GFLSESAEFA QACADAGLVF VGPTPEMITA MGSKSGSKAL MEKAGVPLVP GYHGAAQDEA TLAAAADKIG FPVLVKASAG GGGRGMRVVR KADELAAAIV SAKREAKAAF GDDTLLIERY VDNPRHIEVQ IVGDSHGNLV SLFERECTLQ RRHQKVIEEA PSPTLDAAGR EKVCDAARRA ADAVNYVGAG TIEFVSDGKD VFFIEMNTRL QVEHPVTELI SGVDLVEWQL RVAFGEALPL KQDQLKLNGH AIEARVYAEN PAKNFMPSVG KITTWRTPAE VDGLRIDAGY RSGDSVSPYY DAMLAKVIAW APTRQAAIDR LDRGLNETDV RGVVTNIPFL SALVTHPEVR ANAIDTGFIE RHLAALTAAP SALGDLELAA AVAAILRGED EAAKAEGPSP WRTSGWMPVG RRKRSFLFRR GQGHDHTDHT IELTYGGGSS ALTIDGRELA FAWTAAGDGI DVALGDARSR IHAVVDGAEL YVRTRSGRFE LHLVDPFGGE SEEAVGEDKI VAPLPGTVVA LLAEAGAKLD KGAPILTLEV MKMEQTLRAP FAGTLTAVKC KVGDIVQEGA ELAELEADAD
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