Gene Rpal_2791 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_2791 
Symbol 
ID6410455 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand+ 
Start bp3035350 
End bp3036330 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content69% 
IMG OID642712667 
Productputative lipid kinase 
Protein accessionYP_001991775 
Protein GI192291170 
COG category[I] Lipid transport and metabolism
[R] General function prediction only 
COG ID[COG1597] Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase 
TIGRFAM ID[TIGR00147] lipid kinase, YegS/Rv2252/BmrU family 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0686435 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGACCGCG AATCCGAGAT CGGGCTGGAC CTCGAGGAAG CTGCGCCCAG CGATGGCTCC 
GACCTGGGCA GTGCCATTCC CCAGGCGGCG CCGACGCGCC GGCTGCTGAT GGTGATCAAT 
CGCGGCAGCC GCTCGGGCAG CCAGGCTGTC GGTCTGGCCG GATCCAAGCT CAGCGCCGCG 
GGCTTCGACT TGGTGGTTTC AGCACCCTCC AGTCGCCACG AGGTCGCGCC CTGGATCGAG 
GCCCATGCCG AGGGCGCCGC AGCGGTGGTG ATCGCCGGTG GCGACGGCAC GCTCAATGCC 
GCCGCGCCGG CGCTGATGAA GACCGGGCTT CCGCTCGGCG TCATTCCGGC CGGCACCGCC 
AACGATCTGG CGCGGACGCT CGGCCTGCCG CTCGATATGG AAGCCGCCGC AGACGTGATC 
GCGGCCGGTT ACCGCAAGAC CATCGACCTC GGCGACGTCA ACGGCCACAA GTTCTTCAAC 
GTCGCCAGCG TCGGGCTGAG CACCGATCTG GCGCGCGAGC TCAGCGGCGA AAGCAAGCGC 
CGGTTCGGCC GCCTCAGCTA CGCGCTCACC GCCGTGAAGG TGCTCAGCAA GGCGCGGCCG 
TTCCACGCCG TGATCGTGTC GGGTGAGGAG CAGGTGCGGG TGAAGACGAT GCAGGTCGCG 
GTCGGCAACG GCCGCTACTA CGGCGGCGGC ATGGCGGTGG AGCACACCGC CGAAATCGAT 
GACGGGCAGT TCGATCTGTA TTCGCTGGAA TTTGCGCAGG TGTGGAAGCT GCTCGCGGTC 
GCCTACGATT TTCGCAAAGG CCGCCATGGC CTGTGGCGCG AGGTGCGGGC GGCCCGCGGC 
ACCTCGTTCG AAATCCGCAC GCGCAAGCCG CGTCCGGTCA ATGCCGACGG CGAACTGGTC 
ACCTTCACGC CGGCCCGGTT CGAGTTGCTC CGTGAGGCCG TCAGCGTGTT CGTGCCGAAA 
GATCCGGCGC CGCGCGGCTG A
 
Protein sequence
MDRESEIGLD LEEAAPSDGS DLGSAIPQAA PTRRLLMVIN RGSRSGSQAV GLAGSKLSAA 
GFDLVVSAPS SRHEVAPWIE AHAEGAAAVV IAGGDGTLNA AAPALMKTGL PLGVIPAGTA 
NDLARTLGLP LDMEAAADVI AAGYRKTIDL GDVNGHKFFN VASVGLSTDL ARELSGESKR 
RFGRLSYALT AVKVLSKARP FHAVIVSGEE QVRVKTMQVA VGNGRYYGGG MAVEHTAEID 
DGQFDLYSLE FAQVWKLLAV AYDFRKGRHG LWREVRAARG TSFEIRTRKP RPVNADGELV 
TFTPARFELL REAVSVFVPK DPAPRG