| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2744 |
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| Symbol | |
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| ID | 6410408 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 2985391 |
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| End bp | 2986704 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642712620 |
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| Product | FeS assembly protein SufD |
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| Protein accession | YP_001991728 |
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| Protein GI | 192291123 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0719] ABC-type transport system involved in Fe-S cluster assembly, permease component |
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| TIGRFAM ID | [TIGR01981] FeS assembly protein SufD, group 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACATCG CAGTGGCGAA ACCCGACAAG CCCGACACCG CCAGCGATAA TTTCGCTGCG
GTCAGCGCCC GCGTGCCGGG CGCGGGCAAG GTCGCCGACA CCCGCCGTCA GGCGCTCGAC
ACCTTCCAGC GCATCGGCCT GCCGCATCGG CGGATCGAGG ACTGGAAGTA CACGGACCTG
CGCGCGCTGA TGCGCGAGGT GTTGCCGCTC GCGGCAGCGC CCGAAGCCGC TGCACTGGCT
CAGGCTGAGG CCGCCGCCAA GTTGCACGCG ATCGATGGCG TCCGCCGTCT GGTGCTGGTC
GACGGCGTGC TTGCGCCCGG CCTGTCCGAG CTTGCAGGGC TTGAAGCGGG ACTGTCGATC
CGCAGCCTGC GCGAGGCGCT GCAGAGCGGT GACGATCGTG TGCTGTCGCT CGACACCGCC
GATCCGATGG TGGCGCTCAA CACCGCGCTG ATGACCGATG GCCTCGTCAT CGAGGTCGCG
GACGGCACCA CACTGACGCG GCCGCTGCAC ATCCTTCACA TCGCCTCCGG CGGTGCGCCG
GCCGCGATGT TTACCCGGTC GCGGATCTCG CTTGGCAACG CCGCGGTGGC GACGGTGGTG
GAGAGCTACG TCGCGGGCGA GGGCGCCTCT GCCTATCAGG TTCACGACTC CGCCGTGATC
ACGATCGGTG ACCATGCGCG GCTTGACTAC GTGCGGATCG TCGAGGACTC CCGCGAGGCG
TTCAACATCA CCTCGGCGAC TGTCGCTGTC GGCGCGCATG CGCATTTCAA CGCTTTCGGC
ATTACCACCG GTGGGCTCGC CAGCCGCTAT CAGGCGGTGG TGACGGTGGC CGGCTCGCAT
TCGGAGGTGG AGACCAACGG CGTCAATCTG CTCAATGGCA AGCAGCACGC CGACACCACG
CTGGTCATGA ACCACGACGT GCCGCATTGC GTCAGCCGCG AAGGTTTTCG CGCGGTCGTC
GACGATCGCG GCCACTCGGT GTTCCAGGGC CGGATCAACG TCCGCCAGGC GGCGCAGCAG
ACCGACGCCA AGATGATGAC CCGGGCATTG CTGCTGTCCG ACGAGGCCGA GGTCGACAAC
AAGCCAGAGC TCGAGATCTT TGCCGACGAC GTCACCTGCG GCCACGGCGC TGCGGTCGGT
GCGCTCGACG ATTCCTTGCT GTTCTATCTG CGCGCCCGTG GTCTTCCGCA GAAGGAGGCC
GAGGCGATGC TGATCCGGGC GTTCGTCGGC GAGGCGATCG AAGCGATCGC GGACGACAAT
TTGCGTGAGC TGGTGACCGC GGCGGCGGTG CGCTGGCTGG AGGCGAGGCG ATGA
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| Protein sequence | MNIAVAKPDK PDTASDNFAA VSARVPGAGK VADTRRQALD TFQRIGLPHR RIEDWKYTDL
RALMREVLPL AAAPEAAALA QAEAAAKLHA IDGVRRLVLV DGVLAPGLSE LAGLEAGLSI
RSLREALQSG DDRVLSLDTA DPMVALNTAL MTDGLVIEVA DGTTLTRPLH ILHIASGGAP
AAMFTRSRIS LGNAAVATVV ESYVAGEGAS AYQVHDSAVI TIGDHARLDY VRIVEDSREA
FNITSATVAV GAHAHFNAFG ITTGGLASRY QAVVTVAGSH SEVETNGVNL LNGKQHADTT
LVMNHDVPHC VSREGFRAVV DDRGHSVFQG RINVRQAAQQ TDAKMMTRAL LLSDEAEVDN
KPELEIFADD VTCGHGAAVG ALDDSLLFYL RARGLPQKEA EAMLIRAFVG EAIEAIADDN
LRELVTAAAV RWLEARR
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