Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_2679 |
Symbol | |
ID | 6410342 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 2907414 |
End bp | 2908079 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642712555 |
Product | Protein of unknown function DUF1847 |
Protein accession | YP_001991664 |
Protein GI | 192291059 |
COG category | [R] General function prediction only |
COG ID | [COG4887] Uncharacterized metal-binding protein conserved in archaea |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.613741 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCAAGC CGAAGCCCGA CGTCGTCACC TGCTCCGAAT GCGGGCAATT CAATTGCTAT CGTCACGACA AGCGTTATCC CGGCATCTGC GCGACGACAG ATCTGGCGCC CGAAGAGCGG CAGGAACTGG TCGAGCTGTA TTCGAGCGAT GCGATCGACG CGACGCTGGC GCGCGCGGCG GCCGAGGTCG AGGGGCTGTA TTATTGCAAG CTCAACCGTG TCGAAGAGAC CGTTGCATTC GCACGCCGGA TCGGCGCCAA GCGGATCGGC ATCGCCACCT GCATCGGCCT GATCGAAGAG ACCAAGGTAC TGGTCGACAT CCTGCGCCTC GCAGGCTTCG AGACCCGCAC CGCACTGTGC AAGGTCGGCT CGATCGACAA GACCGAGATT GGCGTGCCCG AAGAGATGAA GATCAAATGC GGCCACGAGG CGTGCTGCAA TCCAGTGTTG CAGGCACGGC TTCTCAATCG CGAAGGGACG CACCTCAATG TCATCATGGG CCTGTGCGTC GGCCACGACT CGCTGTTCAT CCGCCACGCG GAAGCGCCGG TGACGACACT GGTGGTGAAG GACCGAGTAC TGAGCCACAA TCCGGTTGCG GCGTTCCACA CCGTCAAGAC CTACACCAGC CGGATGCTCG ACAAGAAGCG GATGCAGGAG TTGTGA
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Protein sequence | MAKPKPDVVT CSECGQFNCY RHDKRYPGIC ATTDLAPEER QELVELYSSD AIDATLARAA AEVEGLYYCK LNRVEETVAF ARRIGAKRIG IATCIGLIEE TKVLVDILRL AGFETRTALC KVGSIDKTEI GVPEEMKIKC GHEACCNPVL QARLLNREGT HLNVIMGLCV GHDSLFIRHA EAPVTTLVVK DRVLSHNPVA AFHTVKTYTS RMLDKKRMQE L
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