| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2675 |
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| Symbol | |
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| ID | 6410338 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 2904310 |
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| End bp | 2905344 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642712551 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_001991660 |
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| Protein GI | 192291055 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.307401 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCCGCG TATCTTCGCC GCCGGAGATC GGCCTGGTGC TGTACCCCGG GGTGCAGCGT
GCAAGCGTCG ATGGGCTGAC CGACCTGCTC ACCGTCGCCG ATCGCAACGC ACGGCAGCGC
CTGAACCAGA CCGCACCGCT CCTCCGCATC AGCCACCTCG CCTATGACGA GGCGCAGGAT
CGCATCGTCC GCGTATTCGA CAGTCTGCCG GCTGAGGACG GTGCCCCGAC GATCCTGGTG
CTGTTGCCGA GCCTCGAGAA GCCGGCAGAG CCCCCTCAAG CTGGCGGATT GGTGGACTAT
CTGAAATCCC GGCATCAGGA GGGCACGGTG CTCGCCTCAG TATGCGCCGG CACGTTCCTG
CTCGCCGCGA CCGGCGTGCT GGCGGGCCGC GTCGCCACCA CCCACTGGTC CTATGCCGAA
GCGCTGGCGG AGCGGTTCAC GGATATCCGC GTCGATGCCG ACAAGCTGAT CATCGACGAT
GGCGATATCA TCACCGCCGG CGGCATGATG GCATGGACCG ATCTTGGCCT CACGCTGATT
GAGCGCCTGC TCGGTCCGGC GACGATGATC GAAACGGCGC GCAGCTTCAT CATCGATCCG
CCGGGCCGCG ACCAGCGCGC CTACAGCGTG TTCTCGCCGC GGCTCCGGCA CGGCGACGCC
GCGATCCTGA AGGTGCAGCA CTGGCTGCAA CGGATTGATC TTCCGGAGGT GACCGTCGCG
GCAATGGCGC AGCATGCGGG GCTTGAACCG CGCACCTTTC AGCGCCGGTT CCAGCGCGCC
ACCGGCTTTG CGCCGCTGAC TTATTGCCAG AACCTGCGGA TCGGCCGCGC CCGCATCATG
CTGGAAGGCA CGACGCTGCC GGTCGACCAG ATCGCCTGGC AATGCGGCTA CAAGGACCCG
AAGTCGTTTC GCAAGGTGTT CGCCAAGATC GCCGGACTGT CGCCGGGACA GTATCGGCAA
AGGTTTTCTG CGGCACGCCA AGAGCCCGCA CCGCGCCCGC GCAACGCACC GGCACATGCG
GGTGAGCATC GCTGA
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| Protein sequence | MARVSSPPEI GLVLYPGVQR ASVDGLTDLL TVADRNARQR LNQTAPLLRI SHLAYDEAQD
RIVRVFDSLP AEDGAPTILV LLPSLEKPAE PPQAGGLVDY LKSRHQEGTV LASVCAGTFL
LAATGVLAGR VATTHWSYAE ALAERFTDIR VDADKLIIDD GDIITAGGMM AWTDLGLTLI
ERLLGPATMI ETARSFIIDP PGRDQRAYSV FSPRLRHGDA AILKVQHWLQ RIDLPEVTVA
AMAQHAGLEP RTFQRRFQRA TGFAPLTYCQ NLRIGRARIM LEGTTLPVDQ IAWQCGYKDP
KSFRKVFAKI AGLSPGQYRQ RFSAARQEPA PRPRNAPAHA GEHR
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