| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2648 |
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| Symbol | |
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| ID | 6410310 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 2872340 |
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| End bp | 2873257 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642712524 |
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| Product | methylisocitrate lyase |
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| Protein accession | YP_001991634 |
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| Protein GI | 192291029 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2513] PEP phosphonomutase and related enzymes |
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| TIGRFAM ID | [TIGR02317] methylisocitrate lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.843725 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCGTATC TCGTTGCTGC TGATCTCTTC TCCGACCCCG CAGGCGTGCG GTTCCGCTCG
CTGATCGAGC GCGGAGGCAT CGTCCGGATG CCGGGCGCGC ACAATGGCAT GGCCGCGCTG
CAGGCGCGCG CCGCCGGCTT CGAGGCGTTG TATCTGTCGG GCGCCGCGAT GACCGCGTCG
ATGGGGATTC CCGACCTCGG GATGATCACG GTCGACGAGG TGGCGTTCTT CATCCGGCAG
ATCGCGCGGG CAGGCGGCCT TCCCACCCTG GTCGATGGCG ACACCGGGTA CGGCGAGGCC
CTCAACGTCA TGCACATGGT CCGCACCTTC GAGGATGCAG GCGCGGGCGC GGTTCATATC
GAGGATCAGC TCCTGCCGAA GAAGTGCGGC CATCTCAACG ACAAGAAGCT CGCCGACGCG
AACGACATGG CCGCCAAGGT CGCCGCCGCG GCGAAAGCGC GCCGACATCT CTATCTGATC
GCACGAACCG ATGCGGCGGC GAGCGAAGGC ATCGACGGCG CTGTGGCGCG CGCCAGGCTG
TACATCGAGG CCGGAGCCGA CGCGATCTTT CCCGAGGCGC TGACCACGGC CGAGATGTTC
CGCGAATTCG CTGCTCGGAT GCCGGGCGTG CCGCTGCTCG CCAACATGAC CGAGTTCGGC
CGGACACCGT TCTTCACCGC CGATGAGTTT CAGCAGATGG GCTACCGGAT GGTGATCTGG
CCGGTGTCGT CGCTGCGCGT CGCCAACAAG GCGCAGCAGA AACTCTATGC CACGTTGCAT
CGCGACGGTT CGACACAGGC AATGCTCGGC GACATGCAGA CCCGCGCCGA ACTGTACGAA
ACCCTTGGTC TTGATCGCTT CGAGGCGCTC GATGCCTCGA TCGTCCGATC GATCGCGCCG
GACTCGGTGG GATCATAA
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| Protein sequence | MPYLVAADLF SDPAGVRFRS LIERGGIVRM PGAHNGMAAL QARAAGFEAL YLSGAAMTAS
MGIPDLGMIT VDEVAFFIRQ IARAGGLPTL VDGDTGYGEA LNVMHMVRTF EDAGAGAVHI
EDQLLPKKCG HLNDKKLADA NDMAAKVAAA AKARRHLYLI ARTDAAASEG IDGAVARARL
YIEAGADAIF PEALTTAEMF REFAARMPGV PLLANMTEFG RTPFFTADEF QQMGYRMVIW
PVSSLRVANK AQQKLYATLH RDGSTQAMLG DMQTRAELYE TLGLDRFEAL DASIVRSIAP
DSVGS
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