| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2642 |
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| Symbol | |
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| ID | 6410304 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 2864643 |
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| End bp | 2866664 |
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| Gene Length | 2022 bp |
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| Protein Length | 673 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642712518 |
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| Product | anaerobic ribonucleoside triphosphate reductase |
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| Protein accession | YP_001991628 |
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| Protein GI | 192291023 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1328] Oxygen-sensitive ribonucleoside-triphosphate reductase |
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| TIGRFAM ID | [TIGR02487] anaerobic ribonucleoside-triphosphate reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTGTTT CCGACCTGAC CAACCTTCCT CGAGCGATCA TCAAGCGGAG CGGCGCTGAA
GCTGCGTTCG CCAGCGCCAA GATCCGATCC GCGATCGCGC GCGCCGGACA GGCCACGGGG
GAGTTCGGCG AACTCGAAGC GGGGCTTCTC ACCAGTCAGT CGGTCAAGGT GATTGCGCAC
CGCTTCGCCG GCGCCGTGCC GCAGATCGAG CAGATTCAAG ATATCGTCGA GCAGGTGCTG
ATCTCGGCGA ACCATCTGAC CACCGCGCGG GCGTACATCG TCTATCGCGA AAAGCGTTCC
CAGGCGCGCA ACGACCGCAA GGTCGCCGTC GATGCGATCG CGTCGATCAA CGAATATCTC
GACCGCACCG ACTGGCGGGT CAACGCCAAT GCCAACCAGG GCTATTCACT CGGCGGCCTG
ATCCTCAATC TGTCCGGCAA GGTGGTCGCC AACTACTGGC TGTCGCACGT CTATCCGCCG
GAAGTCGGCC GCGCCCATCG CGACGGCGAC CTGCATATTC ACGACCTCGA CATGCTGTCC
GGCTACTGCG CCGGCTGGTC GCTGCGCATG TTGCTCACCG AGGGCTTGAA CGGCGTGCCC
GGCAAGGTCG AGGCCAGCCC GCCGAAGCAT CTGTCGAGCG CAATCGGCCA GATCGTCAAT
TTTCTCGGCA CGCTGCAGAA CGAATGGGCC GGCGCCCAGG CGTTCAGCTC GTTCGACACC
TATCTCGCGC CGTTCCTGCG CAAGGACGGG CTGAGCTACG CCGACGTGCT GCAGGGCATC
CAGGAACTGG TCTACAACCT CAACGTCCCG TCGCGCTGGG GCACGCAGAC GCCGTTCACC
AACCTCACCT TCGACTGGAC CTGCCCGGAA GATCTGCGCG ACGAGGTGCC GGTAATCGGC
GGCGAGGAGA TGGACTTCAC CTATGGTGAG CTTCAGCCCG AAATGGACAT GATCAACCGC
GCCTACATGG AGGTCATGAC CAAGGGCGAC GCCAAAGGAC GCGTCTTCAC CTTCCCGATC
CCGACCTACA ATATCACGCC GGATTTTCCC TGGGAGAGCG AGAACGCCGA ACGGCTGTTC
GAGATGACCG CGAAATACGG CCTGCCCTAC TTCCAGAACT TCCTGAACTC CGAACTGAAG
CCGCACATGA TCCGTTCGAT GTGTTGCCGG CTGCAGCTCG ATCTCACCGA ACTCTTGAAG
CGCGGCAACG GCCTGTTCGG AAGCGCGGAG CAGACAGGCT CGATCGGCGT GGTGACGATC
AACTGCGCGC GGCTCGGTCA TCGGCACCGC GGCGACGAAG CGGGGCTGCT GCGCGCGCTC
GATACCCTGC TCGACATCGC CCGCACCAGC CTCGAGATCA AACGCAAGGT GGTGCAGCGC
TACATGGACG ACGGGCTGTT CCCCTATTCG AAGCGTTATC TCGGCACGCT GCGCAACCAT
TTCTCCACCG TCGGCATCAA CGGCGTCAAC GAAATGATCC GCAACTTCAC CGCGGACTGC
GAGACCATCG CGACGCCGTG GGGGCACGGC TTCGCCGTCC GTGTCCTCGA CCATGTGCGC
GCCAGGATCG TCGCGTTCCA AGAGCAGACC GGCAATCTGT ACAATCTCGA GGCCACGCCG
GCGGAAGGCA CGACCTATCG GTTCGCCAAG GAAGACCGCA AGCGCTTCCC CGGCATCCTG
CAGGCCGGCA CCGAGGACAA TCCGTACTAC ACCAACTCAA GTCAGCTTCC GGTCGGCTTC
ACCGACGATC CGTTCGAGGC GCTGGAACGC CAGGACGATC TGCAGCGCAA ATACACCGGC
GGGACAGTAC TGCATCTCTA CATGGGATCG AAGCTGTCGT CCGGCGAGGC CTGCAAGAAG
CTGGTGCGAC GCGCGCTGGA GAACTTCCGG CTGCCTTACG TCACGGTGAC ACCGACCTTC
TCGATCTGCC CAACCCATGG CTATATCGAA GGCGAACACG CCTTCTGCCC GAAATGCGAC
GCCGAACGCC TCGCGGCCAA GCGGCTCGCC GCCACCCACT GA
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| Protein sequence | MPVSDLTNLP RAIIKRSGAE AAFASAKIRS AIARAGQATG EFGELEAGLL TSQSVKVIAH
RFAGAVPQIE QIQDIVEQVL ISANHLTTAR AYIVYREKRS QARNDRKVAV DAIASINEYL
DRTDWRVNAN ANQGYSLGGL ILNLSGKVVA NYWLSHVYPP EVGRAHRDGD LHIHDLDMLS
GYCAGWSLRM LLTEGLNGVP GKVEASPPKH LSSAIGQIVN FLGTLQNEWA GAQAFSSFDT
YLAPFLRKDG LSYADVLQGI QELVYNLNVP SRWGTQTPFT NLTFDWTCPE DLRDEVPVIG
GEEMDFTYGE LQPEMDMINR AYMEVMTKGD AKGRVFTFPI PTYNITPDFP WESENAERLF
EMTAKYGLPY FQNFLNSELK PHMIRSMCCR LQLDLTELLK RGNGLFGSAE QTGSIGVVTI
NCARLGHRHR GDEAGLLRAL DTLLDIARTS LEIKRKVVQR YMDDGLFPYS KRYLGTLRNH
FSTVGINGVN EMIRNFTADC ETIATPWGHG FAVRVLDHVR ARIVAFQEQT GNLYNLEATP
AEGTTYRFAK EDRKRFPGIL QAGTEDNPYY TNSSQLPVGF TDDPFEALER QDDLQRKYTG
GTVLHLYMGS KLSSGEACKK LVRRALENFR LPYVTVTPTF SICPTHGYIE GEHAFCPKCD
AERLAAKRLA ATH
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