Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_2634 |
Symbol | |
ID | 6410296 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 2853107 |
End bp | 2854798 |
Gene Length | 1692 bp |
Protein Length | 563 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642712510 |
Product | ABC transporter domain protein |
Protein accession | YP_001991620 |
Protein GI | 192291015 |
COG category | [R] General function prediction only |
COG ID | [COG4178] ABC-type uncharacterized transport system, permease and ATPase components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGACCTCCC CGCTTTCCCT TCGCGCCGGC CTGCGCAACG CTTTGCGTAT TGCGGCTCCG TATTTCCGCT CGGATCAGCG CTCGGTTGGC TTGGGTCTTC TGGCGAGCTT GATCGGTGCG CAACTTGTGG TGGTCGGCGC GGCTGTCGCC GAGAACTACT GGCGCAACGC GTTCTTCCAG ACGCTCCAAG ACAAGAACTG GCCGGGCTTC ATCGAACAGT TCTGGGTCTA CGCCGTGATC GCAGTGTTCC ACATCTGCGG GGCGGTCTAT CAGCGCTACC TCAGCCAATG GCTCACCATC CGCTGGCGAG GCTGGATGAC ATCGTACTAT CTCGACAGAT GGCTGGAGGG AGCAGTCCAC TACCGAGCGA TGATGTCGTC TAACGCCGTC GACAATCCGG ATCAGCGGAT CGCCGACGAC ATCCGTTCAT ATATCGGCCT CACGCTGGAA CTCTTGATCG GCGTGATCGG CGCCCTGGCA CGCCTGACCT CGTTCGTCGC AATCTTGTGG GCGCTGTCGA GCAGTATTCC CCTCTCCATC TTCGGCGTTA CTATCCCCGG CTATCTGGTC TGGGCGGCAT TGATCTATGC GATTGCTGGC AGCTTCGTCA CCCACTGGAT CGGCCGCCGA CTGATCCAGA TCGATTTCGA GCAGGAGCGG CGCGAAGCCG ATTTTCGATT CGCGCTCGTG CGCCTTCGCG AGAACAGCGA GGCGGTGGCG CTGCTGCGCG GCGAAGACTT CGAGAAGCGC GGCCTCGCCA TGCGATTTCG AGCCATCACC GACAACTGGT TTCGATTGAT GAACCGACAG CAATTGGTCG GTTTGTTTTC CGAATCCTAC AAGCGCTACT CGCTGTATTT TCCTTACTTC ATTATGGCAC CGCTGTTCTT CGGCGGAACG ATGCAACTCG GCTCGTTCAT GCAGTCCGGA TCAGCGTTCA ATGAGGTTCG GAATTCGTTT TCCTACTTCA TTAACGCCTA CCTGAAGCTC GCGGAGCTTG CGGCCGTGAC GCACCGGCTG TCGCAGTTCA CCGAGGTCGT GGAACAGTCC AAAGCCGCAA ATGTGGAGAG AGCAAGTCCA CCTCACGGCG CCGCACTGGA CGCTTCAGAA ATCGTCGTGA AGACGGCATC CGGCTCAACC ATCATCGCGG TCGGCACGGT TCGGGTCGAA TCCGGCACCT CGATGCTGAT CACAGGACTG TCCGGGGCCG GAAAAACCAG CCTTGTTCGC GCGCTCACAG GCATATGGCC GTTCTTCGAT GGACGGATCT CGACGAGTGC GCACCGAACG CTCGTGCTCC CCCAACGCCC CTACCTCCCG CTCGGCACCC TTCGCGCGGC TGTGTCCTAT CCGGAAGCCC CTGAGCCTTC GAACGCCCCT CGGATCGTCG AGGTGTTGAA GGACGTCGGA CTCGGTGACT TTGTTTCACA GCTGGACCAG TCCGATCGCT GGGACGTCCG GCTTTCGGAG GGCGAAAAGC AGCGCCTGTC GATTGCGCGA GCACTGCTGT ATCGGCCAGA TCTATTGATT CTGGACGAAG TCACATCGGC TTTGGACAAG CCGTCGGAGA TCTCTCTGCA CCGGCTTCTG AGAACGCGCC TCCCCGCGGC GACCATCGTC GCCGTGAGTC ACCAGGATGC ACTCCATTCA GAATATGATC GCATCACCAT TCTCAAGCGG TCGACGGCCT GA
|
Protein sequence | MTSPLSLRAG LRNALRIAAP YFRSDQRSVG LGLLASLIGA QLVVVGAAVA ENYWRNAFFQ TLQDKNWPGF IEQFWVYAVI AVFHICGAVY QRYLSQWLTI RWRGWMTSYY LDRWLEGAVH YRAMMSSNAV DNPDQRIADD IRSYIGLTLE LLIGVIGALA RLTSFVAILW ALSSSIPLSI FGVTIPGYLV WAALIYAIAG SFVTHWIGRR LIQIDFEQER READFRFALV RLRENSEAVA LLRGEDFEKR GLAMRFRAIT DNWFRLMNRQ QLVGLFSESY KRYSLYFPYF IMAPLFFGGT MQLGSFMQSG SAFNEVRNSF SYFINAYLKL AELAAVTHRL SQFTEVVEQS KAANVERASP PHGAALDASE IVVKTASGST IIAVGTVRVE SGTSMLITGL SGAGKTSLVR ALTGIWPFFD GRISTSAHRT LVLPQRPYLP LGTLRAAVSY PEAPEPSNAP RIVEVLKDVG LGDFVSQLDQ SDRWDVRLSE GEKQRLSIAR ALLYRPDLLI LDEVTSALDK PSEISLHRLL RTRLPAATIV AVSHQDALHS EYDRITILKR STA
|
| |