| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2614 |
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| Symbol | |
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| ID | 6410276 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 2826038 |
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| End bp | 2827255 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642712492 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_001991602 |
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| Protein GI | 192290997 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.34834 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCGTCCC ATTCAACGGT TGCCGCGATC GCGGCCCTGG CGTTCGCCGT GGCGCTTGCC
GGTTGCAAGC CTCACCCGGA CGATCACGGC GCCGATTCCG CCGGCGTCGA CCGTCCCGAG
GTCGGCATCG TGACGCTGCG CCCGCAGGCG GTGGCGATAA CCGCGGAGCT TCCCGGTCGG
GTCGTCGCGC CGCAGACGGC CGAGGTGCGT CCCCAGGTGT CCGGCATCGT TCAGCAGCGC
CTGTTCACCG AGGGGAGCGA AGTCGCCGAA GGTGCGTCGC TCTACCAGAT CGATCCTGCG
CCCTACAAGG CGGCCTATGA CAGCGCCGTC GCGGCTTTGC GGAAGGCGGA AGCTGCGGTG
CCCAGCGCGC AGGCCAAGTC TGAACGCTAT CAGGGCCTCG TCAAACAGAA CGCCGTCAGC
AAACAGGATT TCGACGATGC CGTTGCCGCG CTTGCCCAGG CGAAAGCGGA GGTGGCCACC
GCGAAAGCCG CCGTCGAGAC CGCCGGGATC AATCTCGACT ACACGACGAT CAAGGCGCCG
ATCGGCGGCC GGACCGACCG CTCGTCGCTG ACGCCCGGTG CGCTGGTCAC GGCCGGCCAG
ACCGGCTTGC TGACCACGAT CCGCACGCTC GACCCGATTT TCGTCGACGT CATTCAGTCG
AGCACCAACC TGCTGAACCT GCGGCAAGCG ATCGACTCCG GACGCCTGAA AGTGAGCGGT
CCGCATGTCG CGGTGAAACT GAAGCTGGAA AACGGCGCGA TCTATCCGCT GGCCGGCAAG
ATGGAATTTT CCGAGGCCAA TGTCAGCACC TCGACCGGCA CGGTGACGTT ACGCGCGGTG
TTTCCGAATC CGCGGCGACT GCTGCTGCCC GGGATGTATG CCCGCGCCGT GGTCGAAGAG
GGCGTCGCGC CCGACAGCTT CCTGGTGCCG CAGCGCGCCG TCACCCGAAA CACCAAGGGT
GAGGCGGTCG CGATGTTCCT CGACAAGGAC GGCAAGGCCG AGGAACGCGT CCTGTCCGTG
ATCCGCAGCG TCGGCAACAA CTGGCTGATC GGCGCCGGCG TTCACGACGG CGACCGGGTG
ATCGTCGAAG GCACGCAGTA TGTGCGTCCC GGGCAGATAG CCGCCGGCAC CGAAGTCGTG
GTCGACGACA CGACCGGCAA AGTGCGCGAA CGGCTGCCGC GGCAACGACG CGCCGCGCGT
CCGGGGGCGG AGCCATGA
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| Protein sequence | MSSHSTVAAI AALAFAVALA GCKPHPDDHG ADSAGVDRPE VGIVTLRPQA VAITAELPGR
VVAPQTAEVR PQVSGIVQQR LFTEGSEVAE GASLYQIDPA PYKAAYDSAV AALRKAEAAV
PSAQAKSERY QGLVKQNAVS KQDFDDAVAA LAQAKAEVAT AKAAVETAGI NLDYTTIKAP
IGGRTDRSSL TPGALVTAGQ TGLLTTIRTL DPIFVDVIQS STNLLNLRQA IDSGRLKVSG
PHVAVKLKLE NGAIYPLAGK MEFSEANVST STGTVTLRAV FPNPRRLLLP GMYARAVVEE
GVAPDSFLVP QRAVTRNTKG EAVAMFLDKD GKAEERVLSV IRSVGNNWLI GAGVHDGDRV
IVEGTQYVRP GQIAAGTEVV VDDTTGKVRE RLPRQRRAAR PGAEP
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