| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2600 |
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| Symbol | |
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| ID | 6410262 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 2810685 |
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| End bp | 2812082 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642712478 |
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| Product | Pyridoxal-5'-phosphate-dependent protein beta subunit |
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| Protein accession | YP_001991588 |
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| Protein GI | 192290983 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG0031] Cysteine synthase
[COG2524] Predicted transcriptional regulator, contains C-terminal CBS domains |
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| TIGRFAM ID | [TIGR01137] cystathionine beta-synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0422691 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCCTGG CCCGTCTTGC CACACCGAAG GATCGCACGC CCAAGGGGCT GATCGATCTG
ATCGGAAACA CGCCCCTGGT GCAGCTGACA CGGCTGGATG CCGGCCCGTG CCGGTTGTTC
GCCAAACTCG AAGGCCAGAA TCCAGGCGGT TCGATCAAGG ATCGACCGGC GCTGGCGATG
ATCGAGGCGT TCGAGCGCAG CGGCGAACTG CGGCCGGGCG GGACCTTGGT CGAAGCCACC
GCCGGCAACA CCGGCCTCGG GCTGGCGCTG ATCGCCGCGC TCAAAGGCTA CCGGCTGGTT
CTCGTCATCC CGGACAAGAT GAGCCGCGAA AAGGTGCTGC ACCTGAAGGC GATGGGCGCC
GAGGTGGTGA TGACCCGTTC CGACGTCGGC AAGGGGCATC CGGCTTACTA TCAGGATCTT
GCCCAGAAGA TCACTTCCGA AACCCCTGGC GCGGTGTTCG TCAATCAGTT CGCCAATCCG
GCCAATCCGC TCGCGCATGA ATACGGCACC GCGCCGGAAA TCTGGGAGCA GATGGATCGG
CGCGTCGACG CGGTGGTGTG CGGCATCGGC TCCGGCGGCA CGCTGACAGG GATCGCGCGG
TTCTTTCAGC GCGCCTCGCC ATCGACCGAG ATCATTCTGG CCGATCCGAA AGGCTCCGTG
CTGGTCGACG TGGTCGAAGG GCGGGAGCCG GGCCCTGTCG GAAGCTGGCT GGTCGAGGGC
ATCGGCGAGG ACTTCGTCCC GAGCAATGCC GAACTGAAGC TGGTCACACG CGGCTACACC
GTGACCGATG CGGAATCCTT CCACGCTGCG CGTGAGTTGC TGCGACGGGA AGGGATTCTC
GCCGGCTCGT CGTCGGGCAC GCTGCTGGCG GCTGCGCTGC GCTATTGCCG CGAGCAGACC
CGGCCGAAGC GGGTGGTGAC GCTGCTGCCG GACGGCGGCA ACAAATATCT GTCGAAGATG
TTCAACGATA CCTGGATGGC CGATCAAGGC TTCGTGCCGC GCCGGCACGA CGGGGACCTG
CGCGACCTGA TCGTGCGTCG CCATGACGAG GGCGCTTCGA TCACGGTCGC TCCCGAGGAT
ACGCTGAACT TCGCCTATTC GCGGATGAAG CTGTACGAGG TGTCGCAACT GCCGGTGCTG
GTCGACGACC GCGTCGTCGG CATCATCGAC GAGTCCGATC TGTTGATGGC GACGATCGGC
GATCCGGCCA AATTTGCCGA GCCGGTGCAC TCGGCGATGA GCAAGCGGGT CGAAACCGTC
GAGGCGTCGG CGCCGTTCGA GAGCCTGATG CCGGTGTTCG ATCGCGGCCT GGTCGTCGTG
GTCGTCGACG GCTCGCGCTT CCTCGGCCTG ATCACCCGGA TCGACCTGAT CAACCATTTG
CGTAGCAAGG TGCACTGA
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| Protein sequence | MSLARLATPK DRTPKGLIDL IGNTPLVQLT RLDAGPCRLF AKLEGQNPGG SIKDRPALAM
IEAFERSGEL RPGGTLVEAT AGNTGLGLAL IAALKGYRLV LVIPDKMSRE KVLHLKAMGA
EVVMTRSDVG KGHPAYYQDL AQKITSETPG AVFVNQFANP ANPLAHEYGT APEIWEQMDR
RVDAVVCGIG SGGTLTGIAR FFQRASPSTE IILADPKGSV LVDVVEGREP GPVGSWLVEG
IGEDFVPSNA ELKLVTRGYT VTDAESFHAA RELLRREGIL AGSSSGTLLA AALRYCREQT
RPKRVVTLLP DGGNKYLSKM FNDTWMADQG FVPRRHDGDL RDLIVRRHDE GASITVAPED
TLNFAYSRMK LYEVSQLPVL VDDRVVGIID ESDLLMATIG DPAKFAEPVH SAMSKRVETV
EASAPFESLM PVFDRGLVVV VVDGSRFLGL ITRIDLINHL RSKVH
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