Gene Rpal_2558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_2558 
Symbol 
ID6410220 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand+ 
Start bp2764389 
End bp2765063 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content66% 
IMG OID642712436 
Productcytochrome B561 
Protein accessionYP_001991546 
Protein GI192290941 
COG category[C] Energy production and conversion 
COG ID[COG3658] Cytochrome b 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.952608 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGAAG CGAGCGTCGT CGCCTGGGAC GGGCCTACGC GCGTCTTCAA GTGGGCGCTC 
GTCTTCGTCG TCCTCGATGG CTGGATCAGC AACACCTATG GCGGGGCCTA TCCCGCCTGG 
CACAAGCTCA ATGGCTATAC GGCGCTGGTG CTGATCGTCT TCCGCATCCT GTGGGGCTTC 
GTCGGCGGTT CGACCGCCCG GTTCGGCAGC TTTGTCGCGA TGCCGGGCAA GGTGCTGGCC 
TACATCGCCG ACAAGAAGAA GTTTCTCGGC CACAATCCGC TCGGCGGGTG GATGGTGGTG 
GCGCTGCTGG CGCTGGTGCT GGCCATGGCG ATCAGCGGGC TGTTCTCGGC GGATGAAGAC 
CGCCTGATCA TCGAAGGGCC GCTCGCCAAG ACCGTGGCCG ATGCCACCGT CGACACCGCC 
GCGCTGTGGC ACCGGCGGAT CTTCACCGCG ATCGAGGTGT TCGTTGCGCT CCACGTCGCG 
GCGAACGTGA TCTACGCGCT CACCAGCCGT GAGCCGTTGA TCCAGGCGAT GATCACCGGC 
CGCAAGCCCG CCGACACTTA TGCGGATATG CCGGCCGCCG AACCCGGCCC ATGGGGGAGG 
GCGTTCGCTT GCCTTCTCGT GGCGGCGTTC GTGGTGCTGG CGCCGATCTA TGTGATCGGG 
GGACGGCTGC TTTAA
 
Protein sequence
MNEASVVAWD GPTRVFKWAL VFVVLDGWIS NTYGGAYPAW HKLNGYTALV LIVFRILWGF 
VGGSTARFGS FVAMPGKVLA YIADKKKFLG HNPLGGWMVV ALLALVLAMA ISGLFSADED 
RLIIEGPLAK TVADATVDTA ALWHRRIFTA IEVFVALHVA ANVIYALTSR EPLIQAMITG 
RKPADTYADM PAAEPGPWGR AFACLLVAAF VVLAPIYVIG GRLL