Gene Rpal_2552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_2552 
Symbol 
ID6410214 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp2759719 
End bp2760810 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content68% 
IMG OID642712430 
Producttransport system permease protein 
Protein accessionYP_001991540 
Protein GI192290935 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0609] ABC-type Fe3+-siderophore transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.822821 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTACGC TCGACACTGC CATGGTTCGA TCCGGGCGCC CCGCCACATC CACTGTCGTT 
GTCGCTGCGC TTGTTTTCCT GCCGATCGTC ACGGCGCTGC TCTGTCTATC CGCCGGCCGC
TATCAGGTGC CGACCACTCA TGTGTTCGGC ATTCTGCTGG ACGAGCTGTT CGCTCGGTTC
GGCCTCAATG CAGCGGACTG GTTGCCGGCG GGGTGGGGCA CCGCGAGTTG GACGCCGACG
GAGCGGATCG TCGTCACCAC GGTGCGGCTA CCACGGGTCT TGATGGCCGG CATCGCCGGA
GCTGGCCTCG CGTTGTCGGG AGCGGTGCTG CAGGGCATGT TCCGCAATCC GCTGGTCGGT
CCGCAGACCA TCGGCGCCGC GTCCGGCGCG TCGCTCGGCG GCGTGGTCGC GATCCTGTTG
TTCGGCTTCG GCTTGCCGGT GCATCTCGGC GCGTTTGCCG GTGCCGCAAT CGCGCTCGCC
GCGGTGCTGA TCATTCATCG CGGCGATGGT GTCTCACCGG TGCTGACGCT GGTGCTCGCC
GGCGTCGTGA TCGGCGCATT CTGCAGCGCT TTGGTCGGGT TCGTCACTTT CATCGCCGAT
CCCGAGGTGA AGCTGCCCGG CATCGTATTC TGGCTGCTCG GCAGCTTTGC AGCGTCGAGC
TGGCCGAACC TGATGCTGCT GGCGACGTGT ACCATCCTGG GCGGCGGCGT GATGCTGGCG
ATGCGCTGGC GCGTCAACGT GCTGTCGCTC GGCGACGAGG AGGCGCGCAC GCTCGGCGTC
GAGCCCGGGC GCGACCGTGT GATCCTGCTT ACCGCGACCT GTCTGGCGAT CTCGGCGCAG
GTCGCGGTCT CCGGCACGAT CGGCTGGGTC GGCCTGGTGA TCCCTAATTT GGTGCGGATG
GTGGTCGGCG CCGATCATCG CCGGTTGCTG CCGGTGTCGG CGGTGGCGGG CGCGGCGTTC
CTGATGGCGG CCGATACGCT GGCGCGCGAC CTGTCGGCGG CCGAAATTCC GGTCGGCATC
GTTACCGCGA TCGTCGGCAC GCCGGTGTTC GCGTGGCTGC TGCGCCGACA TGCGAGAGGA
CAGACGGCAT GA
 
Protein sequence
MSTLDTAMVR SGRPATSTVV VAALVFLPIV TALLCLSAGR YQVPTTHVFG ILLDELFARF 
GLNAADWLPA GWGTASWTPT ERIVVTTVRL PRVLMAGIAG AGLALSGAVL QGMFRNPLVG
PQTIGAASGA SLGGVVAILL FGFGLPVHLG AFAGAAIALA AVLIIHRGDG VSPVLTLVLA
GVVIGAFCSA LVGFVTFIAD PEVKLPGIVF WLLGSFAASS WPNLMLLATC TILGGGVMLA
MRWRVNVLSL GDEEARTLGV EPGRDRVILL TATCLAISAQ VAVSGTIGWV GLVIPNLVRM
VVGADHRRLL PVSAVAGAAF LMAADTLARD LSAAEIPVGI VTAIVGTPVF AWLLRRHARG
QTA