| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2534 |
|---|
| Symbol | |
|---|
| ID | 6410196 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | + |
|---|
| Start bp | 2736495 |
|---|
| End bp | 2738789 |
|---|
| Gene Length | 2295 bp |
|---|
| Protein Length | 764 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 642712412 |
|---|
| Product | adenylate/guanylate cyclase with Chase sensor |
|---|
| Protein accession | YP_001991522 |
|---|
| Protein GI | 192290917 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4252] Predicted transmembrane sensor domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.263424 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCGGCTGC TGAGCCGGGG CGCGCATCCG CTGCTCGGCC GCGCGGTCCG CGGCTGGGTC
CGGCTGCGGC GGCTGTTTCG CGGCAAGTAC ATGCGCGCCG TGCTCGCCGC GCTGGCGACG
CTGATCGCGC TCACCGCGCT GCGGACCTAC GAGCCGCGCA TCGTCACCGA AACCAAGGAG
CGTGCCTTCG ACGCGTACCA GCGGCTGGCG CCGCGACCGC CGGGGAACGA CCTGCCGGTG
CGGATCGTCG ATATCGACGA CGCCTCGCTC GCCGCGTTCG GGCAGTGGCC GTGGCCCCGG
ACGCGACTTG CGGCGCTGAC CAAGCGGCTC GGCGAGCTCG GTGCCGGCGT GATCGCTTAC
GACATCATCT TTTCCGAGCC GGACCGCACC ACGCCGGAGC GGCTGATCGC CGATATCGCC
GCCGCCGATC TGCCGGACCG CGACCGCGCC GTGGCGCTGC TGAAGAGTCT GCCCGATCAC
GACACCAGCT TCGCCGAGGC GATGCAGCAG ACGCCGACCG TGCTCGGCTT CGCCGCCAGC
CTGCGGCCGA ATGAGACGCG GCCTACGGTG AAGACCGGTC TGGCATTCGT CGGCGTGGCG
CCGGCCAATG TGCTGCCGCC GTTCCGCGGC GCCGTCTCCA ACCTGCCGCA GCTTGATGCC
GCTGCAGCCG GCGTCGGGGC GATCAATCTG TCGGCCAGCG ATCGCGGCGG CGTGGTGCGG
CGGCTGCCGA TGCTGCTGTC CGACGGCGCG CGGGTGTATC CGAGCCTCGC GGTCGAGGCG
CTGCGGGTGG CGCAGGGCCA GAAGGGCGTC ATCATCCGTG GCACTGGTGC CTCCGGCGAC
GACGATGTCG GCGATGCCGC GCTGGTCGAT ATGCGGATCG GCCAGTTCAA GCTGCCGCTG
ACCCAAGATG GCGAAGCCTG GCTATATTTC AATCGCGACC GCCCGGACCG CTACGTCTCC
GCCAAGGACG TGCTCGATCC TGCACAAACC GAGCAGATGC GCGACCGGCT CGAAGGCACC
ATCGTGCTGA TCGGCACCTC TGCCTCCGGG CTCGGCGATG CGCGCGCCAC GCCGATCGGG
CAGGTGATGC CGGGCGTCGC GATCCAGGCG CAGATGATCG AGCAGATCGT GTCGCAGGAA
TTTCTCGAGC GGCCGGACTG GGCGAACGGC TTCGAGATCG TGATGACGCT ACTGCTCGGC
TCGCTGGTCG CGGCGCTGGT GCTGATCGCC GGCGCGCGGT TCTCGCTGGT CGCCTGTGCG
CTGGTGTTCG TCGGCGCGGT CGGTGGCTCG TGGATCGCGT TCTCGCACTT TCGGCTTCTG
ATCGACCCGG TGTATCCGTC ACTGGCGACG CTATTGACCT ACATCGCGGT CGAGCGCGTG
CTGCACACCG CATCGGACCG CGAGAAGAAG TTCGTGCGCC AGGCGTTCGG CCAGTATCTG
GCGCCGGATC TGCTCGCCCA GCTCGAGCGC ACGCCGGACG GTCTGCGGCT CGGCGGCGAG
CAGCGCGAAC TGAGCGTGAT GTTCATGGAC GTGCGCGGCT TCACCCCGAT CTCCGAGGCG
CTGAGCGCGA CCGAGCTGGT GGATTTCATC AACACGCTGC TGTCGCCGCT GTCCGACGCG
ATCCAGGACG AGCTCGGCAC CATCGACAAG TATATCGGCG ACTCGATCAT GGCGTTCTGG
AACGCGCCGG TGGACGTGCC CGATCACGCA GCACGTGCCT GCCGCGCCGC ACTCAAGATG
CGCAGCATCG TCGAACAGCT CAACGACAGC GATGCGTTCG GGTTCGCCGC GCGTGGCTTC
GCCGATCCGG TGGTGCGGAT CGGCATTGGC CTCAACACCG GCACGGCCTG CGTCGGCAAC
ATGGGCTCTT CGCGACGCTT CAACTACTCG GCGATGGGCG ATGTGGTGAA CGTCGCGGCG
CGGATCGAAA GCGCCTCCAA GGAATTCGGC ACTGATCTGC TGGTGTCCGA AGAGGTCGCG
CGCGCCGCGC CGAAGCTGGC GCTGCTCGAA GCCGGTGAGA TCAAGCTGAA GGGCAAATCT
CAACCGGCAC GGCTCTATGC GCTCGCGGGT GACGAAGCCT TCGCGTCGTC CGAGACCTTC
GCCGAGCTGC AACGGCTGCA TCGCGACCTG CTCGACGCGC TCGCTGCCGG TGATGGAGTG
CGCGCGCACG CGATCCTGGC CACGTGCCGA ACCCTAGCGC CGCCGGCGCT CGCCGGGTTG
TACGATCACT TCGCGCGGCG CGTTGCAACG CTGGCCGACG CGCCTCGGCC GGTGCTGGAC
CACACCGGCG GTTAG
|
|---|
| Protein sequence | MRLLSRGAHP LLGRAVRGWV RLRRLFRGKY MRAVLAALAT LIALTALRTY EPRIVTETKE
RAFDAYQRLA PRPPGNDLPV RIVDIDDASL AAFGQWPWPR TRLAALTKRL GELGAGVIAY
DIIFSEPDRT TPERLIADIA AADLPDRDRA VALLKSLPDH DTSFAEAMQQ TPTVLGFAAS
LRPNETRPTV KTGLAFVGVA PANVLPPFRG AVSNLPQLDA AAAGVGAINL SASDRGGVVR
RLPMLLSDGA RVYPSLAVEA LRVAQGQKGV IIRGTGASGD DDVGDAALVD MRIGQFKLPL
TQDGEAWLYF NRDRPDRYVS AKDVLDPAQT EQMRDRLEGT IVLIGTSASG LGDARATPIG
QVMPGVAIQA QMIEQIVSQE FLERPDWANG FEIVMTLLLG SLVAALVLIA GARFSLVACA
LVFVGAVGGS WIAFSHFRLL IDPVYPSLAT LLTYIAVERV LHTASDREKK FVRQAFGQYL
APDLLAQLER TPDGLRLGGE QRELSVMFMD VRGFTPISEA LSATELVDFI NTLLSPLSDA
IQDELGTIDK YIGDSIMAFW NAPVDVPDHA ARACRAALKM RSIVEQLNDS DAFGFAARGF
ADPVVRIGIG LNTGTACVGN MGSSRRFNYS AMGDVVNVAA RIESASKEFG TDLLVSEEVA
RAAPKLALLE AGEIKLKGKS QPARLYALAG DEAFASSETF AELQRLHRDL LDALAAGDGV
RAHAILATCR TLAPPALAGL YDHFARRVAT LADAPRPVLD HTGG
|
|---|
| |