Gene Rpal_2504 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_2504 
Symbol 
ID6410166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp2703357 
End bp2704553 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content62% 
IMG OID642712382 
Productsodium/glutamate symporter 
Protein accessionYP_001991492 
Protein GI192290887 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0786] Na+/glutamate symporter 
TIGRFAM ID[TIGR00210] sodium--glutamate symport carrier (gltS) 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAATCG ATGCCTTCTA TACGTTCACG ATCGCCGTCA TCCTGCTTCT GACCGGCAAG 
ATAGCGACAC TGAACGCGCC GCTGCTGCGC AAATACTCCA TTCCCGAGCC GGTCATCGGC
GGGTTCCTGT GCACAGCGGT GGTCGCCCTC AGCTACACGC TTTTTGATCG GCGGCTCACC
TTCGATCTCG CGATGCGCGA CTTTCTGCTT CTCTTGTTCT TTGCGGGCAT CGGCCTGAAG
GCCGAGATCA AGATGCTTCT GGCCGGCGGC CGTCCGCTGG TCATCCTGCT GTCGCTCGCT
GACGTCCTGA TGCTGATCCA GAACTTTGCC GGCATGGGGA TGGCTTCGCT GTTCGGACTG
GAAGCCAAGG CCGGACTGAT GGTGGGCTCG ATCTCGCTGA CCGGCGGCAT CGGCACGACG
CTCGCCTGGG CACCGACATT CACCGAGCGG CTCGGCATCA CCAACGCAAT GGAATTGGGT
GTTGCGGCCA ATACGGTCGG GCTGATAGCG GCCTGCATGA TCGGCGGCCC CGTGGCCGCC
TTCCTGATGA AGCGTCACGG TGTCGCCGCC ACCGACGACC CCGAACTCGC CATCGGCGTT
TCCAATGACG GCCGTCAGCC CAAGCTCGAC TACTTCTGCA TTCTTTGGGC TGTGCTGGCT
TTGAACCTCG CCATCATCCT CGGGCTCGGC ATTCATGATG CGCTGACACG CACAGGCCTG
AACCTGCCCG CCTTCGTAAG CTGCCTGATG GCCGGAATCC TGATCCGCAA CCTCATGCCC
ATCGCTGTGA GTTCGCGCGT CCAGAAGCTT TGGCCCGGCG TGGACGACGG GCTGACCCTG
GTATCCGATC TCGCCCTCGG CCTGTTCCTG ACCATGGCGT TGATGGGGCT TCAGCTCTGG
CAACTCGATG GCGTCTTCAC CTTCGTCGCC TCGGCCCTTT TCGTGCAGAT CATCCTGGCC
GTCATCTTCA CCATATCGAT CGTGTTCCGC TTCATGGGGA AGGACTACGA GGCAGTGGTG
ATCTCGGCGG GCTTCGGCGG AATCGCGCTG GGCTCGACGG CCACCGCCAT TGCCAACATG
ACAGCGGTCA CCCAGCAATA CGGCGCCGCC CACCGCGCCT TCATCGTCGT GCCGCTGGTG
TGCGGCTTCT TCATCGACAT CGTCAACGCC CTGATCATCT CCGCCTTTGT CGGTTGA
 
Protein sequence
MEIDAFYTFT IAVILLLTGK IATLNAPLLR KYSIPEPVIG GFLCTAVVAL SYTLFDRRLT 
FDLAMRDFLL LLFFAGIGLK AEIKMLLAGG RPLVILLSLA DVLMLIQNFA GMGMASLFGL
EAKAGLMVGS ISLTGGIGTT LAWAPTFTER LGITNAMELG VAANTVGLIA ACMIGGPVAA
FLMKRHGVAA TDDPELAIGV SNDGRQPKLD YFCILWAVLA LNLAIILGLG IHDALTRTGL
NLPAFVSCLM AGILIRNLMP IAVSSRVQKL WPGVDDGLTL VSDLALGLFL TMALMGLQLW
QLDGVFTFVA SALFVQIILA VIFTISIVFR FMGKDYEAVV ISAGFGGIAL GSTATAIANM
TAVTQQYGAA HRAFIVVPLV CGFFIDIVNA LIISAFVG