Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_2453 |
Symbol | |
ID | 6410115 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 2647381 |
End bp | 2648130 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642712332 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001991442 |
Protein GI | 192290837 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.728081 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCAAGA CACTGCAAGG CAAAGTGGCG CTGGTGACCG GCGCATCGAA GGGCATCGGC GCGGAGATCG CGCTGAAGCT CGCGGCCGAA GGCGCCGCGG TCGCCGTGAA CTACGCCTCC AGCAAACAGG GCGCCGACGA CGTCGTGGAC AAGATCACCG CGCAAGGCGG CAAAGCGATC GCGGTCGGCG GCAGCGTCGC CGATCCCAAG GAGGCGCAGG CCATCGTCGA TGCGACCGTC GCAGCGTTCG GTCCGATCGA CGTGTTGGTC AACAATGCCG GCGTGTATGA ATTCGGCGCG CTCGATGACA TCACGCCGGA GCACTTCCAT CGCCAATTCG ACGTCAACGT GCTCGGGTTG CTGCTGGTGA CGCAAGCGGC CGCGCGGCAG TTCAACGACG GTGGCAGCGT CGTCAATATC TCATCCGGCG TTTCGACGAT CGCGATGCCA AACACCGCGG TGTACGGCGC CACCAAGGCG TCGGTCGATC TGATCACGGC GGTGCTGGCG AAAGAACTGG CGCCGCGCAA GATCCGCGTC AACGCGGTCA ACCCCGGCAT GGTGGTCACC GAAGGCGTCA AGTCTGCCGG CTTCCATGAC GGCGAGATGC GAAAGCAGGT CGAAGCGATC ACCCCGCTCG GCCGCATCGG CGAGGCTGCC GAGATCGCTT CGGTCGTCGC CTTCCTCGCC TCCGACGGCG CGTCTTACGT GACGGGTGAG ACGCTGCATG TCACCGGCGG GCTCAAGTAA
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Protein sequence | MTKTLQGKVA LVTGASKGIG AEIALKLAAE GAAVAVNYAS SKQGADDVVD KITAQGGKAI AVGGSVADPK EAQAIVDATV AAFGPIDVLV NNAGVYEFGA LDDITPEHFH RQFDVNVLGL LLVTQAAARQ FNDGGSVVNI SSGVSTIAMP NTAVYGATKA SVDLITAVLA KELAPRKIRV NAVNPGMVVT EGVKSAGFHD GEMRKQVEAI TPLGRIGEAA EIASVVAFLA SDGASYVTGE TLHVTGGLK
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