Gene Rpal_2408 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_2408 
Symbol 
ID6410070 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand- 
Start bp2596713 
End bp2597195 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content62% 
IMG OID642712287 
Productflavodoxin FldA 
Protein accessionYP_001991397 
Protein GI192290792 
COG category[C] Energy production and conversion 
COG ID[COG0716] Flavodoxins 
TIGRFAM ID[TIGR01752] flavodoxin, long chain 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.226515 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGTCA ATGTGATTTT CGGATCCGAT GCCGGTGCGA CCCGGGCGGT CGCCTCGCGG 
ATCGCCAAGC GGCTGCAGGG CCGCGCCGTC GATATCAAAT CAGCCACCAC CACCGATTTC 
GAGGCCTGCA GCCTGTTGAT CCTCGGTGCC CCGACTTACG GTTTCGGCGA TCTGCAGACC 
GACTGGGAAG CCAACATCGA CAAGCTCACC GGCGCCAATC TGTCCGGAAA GAAGGTGGCG 
CTGTTCGGCA CCGGCGATCA GACCAACTAC CCAGATAGCT TCGTCGACGC GATGGGGCTG 
CTGTACGACC ACGTGGTCGA TCTCGGCGCC GACGTCGTCG GCTTCACTGA AACTGCGGGC 
TACGACTACA CCGCCTCCAA AGCGGAACGC GACGGCCGCT TCGTCGGCCT CGCGCTCGAC 
GAGGACGGCC AATCATCCAA GACCGAAAAG AGGATCACCG AATGGATCAG TCGTCTCACA 
TGA
 
Protein sequence
MSVNVIFGSD AGATRAVASR IAKRLQGRAV DIKSATTTDF EACSLLILGA PTYGFGDLQT 
DWEANIDKLT GANLSGKKVA LFGTGDQTNY PDSFVDAMGL LYDHVVDLGA DVVGFTETAG 
YDYTASKAER DGRFVGLALD EDGQSSKTEK RITEWISRLT