| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2356 |
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| Symbol | |
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| ID | 6410018 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 2544333 |
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| End bp | 2545331 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642712236 |
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| Product | ApbE family lipoprotein |
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| Protein accession | YP_001991346 |
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| Protein GI | 192290741 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGCAAT CTACTCTCAC CCGACGGCGT TTCGTCACGA TCGTTGCCAG TGCGTTTGGC
GTCGCGATGC TCGGCCGCGT GGTGCCGTCG CGCGCGAGCG AGCCGGTGCG CTGGCGCGGC
GCGGCGCTCG GCGCGCAGGT GTCGATCGAG ATCCACCATC CTGATCGCGT CGCCGCCGAG
AGGCTGGTGG AGAGGGGCGT GCGCGAGGTA CGCCGGCTCG AGCAGATGTT CAGCCTGTAT
CGGCCGGACT CGGCGATCTG CGCGCTCAAC CGGTCAGGTG TGCTGATCGC GCCGGACCGC
GATGTGGTGG CGCTACTGCA GACGACGTTA GACTTCGCCG CGCAAACCGG CGGCGTATTC
GATCCCACCG TGCAGCCTCT GTGGCAGCTG TATCGACGCC ACTTCGAGCA GGCCGGGGCG
GATCCGTCCG GTCCAGCGAA GGCAGACGTC GCAGGTGCGC TGGCGAAGGT CGGATACGAT
GGCGTGCTGG TGTCAGCCGA TCGGATCGCG CTGAAACGAC CGGGCGCCGC GATCACGCTC
AATGGTATCG CCCAGGGCTT CGCCACCGAT CGCGTGGTCG ATCTGCTGCG CAAGGGCGGG
ATGACCAGCA CCCTGGTCGA CATCGGTGAG ATCCGTGCGA TCGGTGCCCG GCCGGACGGC
GTGCCGTGGC GGGTCGGACT GGCCGATCCG GAAACGACGA GTGCCAACCT CGGCACCGTC
GATCTGGTTG ACCGCGCGGT TGCGACGTCC TCTGGCGCCG GCTTCCGGTT CGATCCGGCC
GGGCAGTTCA CGCATCTGTT CGATCCCTCG ACCGGACGCA GCCCGGCGCT GTATCGTTCG
GTCAGTGTCG TCGCGCCCAC CGCGACCGAG GCCGATGCGC TGTCGACCGC GTTCAGCGTG
CTGGAGCGTG GCCGCATCGA TGCGATCGTT CAGGCGAGGG CAGGCGTCGA GGTGTTGCTC
GCCGATGCTG AGGGAGGCGT GCAGTGGCTG CGCGGGTAG
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| Protein sequence | MSQSTLTRRR FVTIVASAFG VAMLGRVVPS RASEPVRWRG AALGAQVSIE IHHPDRVAAE
RLVERGVREV RRLEQMFSLY RPDSAICALN RSGVLIAPDR DVVALLQTTL DFAAQTGGVF
DPTVQPLWQL YRRHFEQAGA DPSGPAKADV AGALAKVGYD GVLVSADRIA LKRPGAAITL
NGIAQGFATD RVVDLLRKGG MTSTLVDIGE IRAIGARPDG VPWRVGLADP ETTSANLGTV
DLVDRAVATS SGAGFRFDPA GQFTHLFDPS TGRSPALYRS VSVVAPTATE ADALSTAFSV
LERGRIDAIV QARAGVEVLL ADAEGGVQWL RG
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