| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2344 |
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| Symbol | |
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| ID | 6410006 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 2529112 |
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| End bp | 2530383 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642712224 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_001991334 |
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| Protein GI | 192290729 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGTCTT CGATCGCCAC GCGGCTCGCG TGTGCGGCCG TCTTGCTCGC TGGCTGTGTG
CTGGCGGAAG AGGCCCGCGC GCAAACGCTG ACTATGGGCA ACGCGCTGCA GCGCGCCCTC
AACGCCAGTC CGCGGCTTAC CGCCGCCGAA CGTGACGTCG GCATCGCGCG GGGCCAACGC
ATTCAATCCG GCGCGCTGAT CAATCCGGAG ATCTCCTACG AGCAGGACAA TTCGTTCGGC
TCCGGCACCT ATCGCGGCAC CCGGTCTGCG GAGTCGACGC TGCAAATCAG CCAGATGTTC
GAGCTGTGGG GCAAGCGCGA CGCCCGCGTC GCCGCCGGGC AGGCCGGACT CGATGCCGCC
TCCATTGGTC GCCAGGCGGT GCGGCTCGAA GTGCTGTCCG AGACCGCGAT CGCCTTTGTC
ACGGTGCTCG GGCTGCAGCG GCGCATTCAG ATTCTCGACG AGCAGATCGC CGCGATCGAC
GCGATCACGC CGCTGCTGCA GCGCCGCGTC GAAGCCGGCG CGTCGTCGGT GGCGGAGACC
GGCCGAGCCG AGGTCGCTTC CGCGCTGGTG AAGGCGGATC GCGAGCGCAC CCGGTCGGCG
CTCGCTACAG CCCGCCGCGA GCTCGCGATC CTGATGGGCG ACACGGCGGC GAAGTTTGCC
GCGGTCTCCG GCCGTCTCGA GGCGATCGGC AAACCGCCGG CGTTCCAGTC CGTGATCGCG
ACGATCGACG CCAATCCGCA ACTGGTGCGC TGGAAGGCGG TATATGCGCA GCGCAACGCC
GAACTTTTGC TGGCGCGGCT CAAGCCGTAT CCGGACGTCA CCGTGGCGGC CGGCTGGCGC
CGCTACAACG AGACCGGCGA TAACGCCGTC CGCTTGTCGG TGTCGGTGCC AATCCCGCTG
TTTGATCAGA ACCAGGGCAA CATCCTGTCG GCGCAGGAGA GTCTGGCCAA GACTACGGCC
GAACGACAGG CCAATCGCAA TACGCTGATC GTGATCGCGG GACGCGCCTA CGACTCGCTG
CAAGGCTCAC TGCGCGAGCT GGCGATCCTG CGCGATACCG CGATCCCGAA AGCGAGGGAT
GCCGCCGCCG CGATCTCCGA AGGCTACGGC CAGGGACGCT ATTCGCTGCT TGAGGTGCTC
GATGCCCAAG GCAGCGTCGC GCAGGCGCGG CTGCGCGAGC AGGAGGCACA GCAGAATTTC
CATGTCGCCG TCGCTACCAT CGAGGGGCTG GTCGGGAATC CGTTCGCATT GGCGCGGGGA
GGCGCGCGAT GA
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| Protein sequence | MLSSIATRLA CAAVLLAGCV LAEEARAQTL TMGNALQRAL NASPRLTAAE RDVGIARGQR
IQSGALINPE ISYEQDNSFG SGTYRGTRSA ESTLQISQMF ELWGKRDARV AAGQAGLDAA
SIGRQAVRLE VLSETAIAFV TVLGLQRRIQ ILDEQIAAID AITPLLQRRV EAGASSVAET
GRAEVASALV KADRERTRSA LATARRELAI LMGDTAAKFA AVSGRLEAIG KPPAFQSVIA
TIDANPQLVR WKAVYAQRNA ELLLARLKPY PDVTVAAGWR RYNETGDNAV RLSVSVPIPL
FDQNQGNILS AQESLAKTTA ERQANRNTLI VIAGRAYDSL QGSLRELAIL RDTAIPKARD
AAAAISEGYG QGRYSLLEVL DAQGSVAQAR LREQEAQQNF HVAVATIEGL VGNPFALARG
GAR
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