| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2341 |
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| Symbol | |
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| ID | 6410003 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 2525654 |
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| End bp | 2528011 |
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| Gene Length | 2358 bp |
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| Protein Length | 785 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642712221 |
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| Product | Ornithine decarboxylase |
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| Protein accession | YP_001991331 |
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| Protein GI | 192290726 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1982] Arginine/lysine/ornithine decarboxylases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.788512 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACTACT TCAGGCGTTT CACCTTCCTG TTCTCGGCAC CGACCTTCGA AGCGGATGAT
CTCGAAGGCA TTCGGTTCAA TCAGATCGTC GCGGAGATCG AGCGGTCCGG CTTCGAGATC
GTCAAGGCGC GCAAGCTGGA AGATGCCGAG ATCGCGGTGC AGACCGACGC CGCGATCGGC
TGCATGGTGG TCGACTGGGG CAAGAAGGGC CTCGAGGGCA AGACCGCCGC GCTGATCAAC
CTGATGCGCC GGCGAGGCCT CGACTTTCCG ATCGTGCTGC TGATCCGCCG CAAGAGGTTC
GAGGAAGTGC CGGTCGAGGT GCTCGATTTC ATCGACGGCT ACGTGTTTCT GTCCGAGGAG
ACGCCGACCT TCATCGCCCG CAACCTGATC AGCCGGCTGA AGCAATATGC CGACACGCTG
AAGACGCCGT TCTTCGGCGC GCTGGTCGAC TATGCGGAGG AGGGCAACCA GCTCTGGACC
TGCCCCGGCC ACAACGGCGG CATGTTCTAC AGCCGCAGCC CGATCGGGCG GGTGTTCATC
GAGCATCTCG GCGAGGCGGT GTTCCGCGAT GACCTCGATA ATTCGGTGCT CGACCTTGGC
GATCTGTTGA CCCACGAGGG GCCGGCGCTG CGCGCGCAGA AGGAAGCCGC GCAGATCTTC
GGTGCCGAGA AGACCTATTT CGTGCTCAAC GGCACCTCGA CCTCCAACAA GGTCGCCCTC
GGCGCGCTCG TCTCCGACGG CGATCTGATC CTGTTCGATC GCAACAATCA CAAGGCGGCC
CATCACGGCG CGCTGATGAT GGGCGGCGGC ATTCCCGTCT ACATTTCCAC CGTTCGCAAC
GCCTGGGGCC TGATCGGGCC GATGGCGTGG GACGCACTGG ATGAAGAGGC GCTGCGCGAG
TGCATCCGCC GCCATCCGCT GGTCAAGGAT TCCGAAGCGT GGCGCAAGCC GCGCCCGTTC
CGCGTCGCCG TGGTCGAACA GTGCACCTAC GACGGCACCA TCCACAGCGC CGAGATGATC
CTGCGCCGCA TCGGGCATTT GTGCGATTAC ATCCTGTTCG ACGAAGCCTG GGCCGGCTTC
ATGAAGTTTC ATCCGCTGTA TGCCGGCCGC TTCGCGATGG GGCTGGCGAA CCTCGGCGAC
GATGCCCCCG GCATCATCGC GACGCAGTCG ACCCACAAGC AGCTCGCCAG TTTCTCTCAG
GCGTCGCAGA TCCACATCAA GGATCGCCAC ATCCGCGGCC AGAAACGGCG GGTCGAGCAT
CGGCGCTTCA ACGAGAGCTT CATGCAGCAC GCCTCGACGT CGCCGTTCTA TCCGCTGTTC
GCCTCGCTCG ATGTCGGCGC GCAGATGATG AAGGGCCGCT CCGGCGAAGT GCTGTGGGAC
GATACGATCC GGCTTGGTAT CGAGCTGCGC AAGAAGATCC GCGCGGTGCG GCGCGAGTTC
GAGGAGAAAG AGGCGCGGCC TGAGCGGCGC TGGTTCTTCG ATCCGTTCGT GCCCGATCGG
GTGACGATCG CGGACGCCGC CCGTGAAGGC GCGGTGCACG ATGTCGCCTG GGAGGCCGTG
AGCACCGACC AGCTCGCGAC CGACCCAGCA TTCTGGCAGA TCGCGCCGGG TGCGGCCTGG
CACGGCTTTG CCGATATGGC GCCTGGCTTC GCCATGACCG ACCCGAACAA GCTGACGCTG
CTGACGCCGG GCTTCGACCG GGCCACCGGC CGCTATGCCG AGCACGGCGT GCCGGCGCCG
GTGGTGGCGC AATATCTGCG CGAGAACCGC ATTGTTCCGG AAAAGAACGA TCTCAACTCG
CTGCTGTTTC TGCTGACGCC GGGCGTCGAG GCGAGCAAGG CCGGTACGCT GATCAGCGGC
CTCGTCGCGT TCAAGAAGCT GCACGACGAC AACGCGCCGC TCGACGAGGT GATCCCGGAA
TTCAGCCGGC GCCGGCCCGC GCGCTATGCC GGGGTACGGC TGCGCGATTT GTGCGGGCAG
ATGCACCGGT TCTTCCGCGA CGCCGATGTC AGCGCGCTGC AGGCCAAGCA GTTTCTGCCC
GAACATCTAC CCGAGATCGC GATGTCGCCG CACGATGCGG CGCGCTGCCT GGTCCGCAAC
GACGTCGACT ATCTGCCGAT CAGTCAGATC GCGGGCCGGA TCGCCACCAC GCCGTTCGTG
GTCTATCCGC CGGGGATCGC GACCATCGTG CCCGGCGAGC GGCTGAGCGA GCGAGCCAAG
CCGATGCTTG ATTACTTGCA GATGTTCGAG CGCAGCTTCA ACGAATTCCC CGGCTTCGAA
GTCGAGATTC AGGGCGTCTA TCGCGAGTTC GACGAATTGG GCCGGGTTCG TCTCTACACC
TATGTCGTGG CCGAATAG
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| Protein sequence | MDYFRRFTFL FSAPTFEADD LEGIRFNQIV AEIERSGFEI VKARKLEDAE IAVQTDAAIG
CMVVDWGKKG LEGKTAALIN LMRRRGLDFP IVLLIRRKRF EEVPVEVLDF IDGYVFLSEE
TPTFIARNLI SRLKQYADTL KTPFFGALVD YAEEGNQLWT CPGHNGGMFY SRSPIGRVFI
EHLGEAVFRD DLDNSVLDLG DLLTHEGPAL RAQKEAAQIF GAEKTYFVLN GTSTSNKVAL
GALVSDGDLI LFDRNNHKAA HHGALMMGGG IPVYISTVRN AWGLIGPMAW DALDEEALRE
CIRRHPLVKD SEAWRKPRPF RVAVVEQCTY DGTIHSAEMI LRRIGHLCDY ILFDEAWAGF
MKFHPLYAGR FAMGLANLGD DAPGIIATQS THKQLASFSQ ASQIHIKDRH IRGQKRRVEH
RRFNESFMQH ASTSPFYPLF ASLDVGAQMM KGRSGEVLWD DTIRLGIELR KKIRAVRREF
EEKEARPERR WFFDPFVPDR VTIADAAREG AVHDVAWEAV STDQLATDPA FWQIAPGAAW
HGFADMAPGF AMTDPNKLTL LTPGFDRATG RYAEHGVPAP VVAQYLRENR IVPEKNDLNS
LLFLLTPGVE ASKAGTLISG LVAFKKLHDD NAPLDEVIPE FSRRRPARYA GVRLRDLCGQ
MHRFFRDADV SALQAKQFLP EHLPEIAMSP HDAARCLVRN DVDYLPISQI AGRIATTPFV
VYPPGIATIV PGERLSERAK PMLDYLQMFE RSFNEFPGFE VEIQGVYREF DELGRVRLYT
YVVAE
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