Gene Rpal_2222 details

Gene Information

• Locus tag: Rpal_2222
• ID: 6409882
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodopseudomonas palustris TIE-1
• Kingdom: Bacteria
• Replicon accession: NC_011004
• Strand: +
• Start bp: 2409898
• End bp: 2411787
• Gene Length: 1890 bp
• Protein Length: 629 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 642712106
• Product: K potassium transporter
• Protein accession: YP_001991218
• Protein GI: 192290613
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG3158] K+ transporter
• TIGRFAM ID: [TIGR00794] potassium uptake protein

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 0.569984
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCCCCA GCGCGGCAAC CACCGAAGCG CCTGAACAAA CCGGCTTTTG GGCGCTCACC 
CTCGGCGGGA TCGGCGTCGT TTTCGGCGAT ATCGGCACCT CTCCCTTGTA CGCGTTCCGC 
GAAGCGGTCG CCGGCGCGGC TGGCGGCGCA CCGGCAAGCC GGGTGCTGGT GCTCGGGGTG 
CTGTCGCTGA TTCTGTGGGC GCTGCTGATC GTCGTCACCG CCAAGTACGT GCTGCTGCTG 
CTGCGCGCCG ATAACAACGG CGAGGGCGGC ACGCTGTCGC TGATGGCGCT CGGCCGGCGC 
GCGCTGGGCC GCCGCAGCCT GTTTCTCCTG GTGCTCGGCG TGATCGGCGC CTCGATGTTC 
ATCGGCGACT CGATGATCAC GCCGGCGATC TCGGTGCTGT CGGCGATCGA GGGCTTGAAG 
ATCGCGGCCC CCGCGCTCGA ACACTACGTC GTCCCGCTGA CGGTGCTGGT CCTGGTTCTG 
TTGTTCGGCG TGCAGAGCCA CGGCACGGCG ATTGTTGCGC GGTTCTTCGG CCCGGTGATG 
CTGGTGTGGT TCGCCACGCT GGCGGCGATG GGCGCGATGC ACATCATGGA CGATCCATCG 
GTGCTGGCCG CCATCAACCC GTGGTACGCG GCGCAATTCC TCGCAAGCCA CGGCACCATC 
GGGCTGGTAA CGCTGGGCGC GGTGTTTCTG GCCGTCACCG GCGGCGAGGC GCTGTACGCC 
GATCTCGGCC ATTTCGGCCG TCGCCCGATT CAGACCGCCT GGCTCGGCTT CGTACTGCCG 
GCTCTGCTGA TCAATTACTT CGGCCAGGGC GCGCTGGTGC TGTCCAATCC GGCGGCGCTG 
GAAAATCCGT TCTACAAGAT GGTGCCTGAG GCGTTGGTGT TGCCGCTGAC GCTGATGGCG 
ACGGCGGCGA CGGTGATCGC CAGCCAAGCG GTGATCACCG GCGCGTTCTC GCTGATCAGC 
CAGGCGGTGC AACTCGGGCT GCTGCCGCGG TTCGAGGTGC GTTACACCTC CGAGACCAAT 
GCCGGGCAGA TCTACCTGCC GCGCGTCAAC GCGTTGCTGC TGACCGGCGT ATTGCTGCTG 
GTACTGCTGT TTCAGACGTC CAGTCGGCTT GCCTCCGCCT ATGGCATTGC GGTGTCCACC 
ACGATGGTGG TCGACGGCAT CATGGGCTTC GTGGTGATCT GGAAGCTGTG GCGCTGGAGT 
TGGCCGGCTG CGGCGCTGGT GATCCTGCCG CTGGTGCTGG TCGATGCGAT GTTCTTCAGC 
GCCAATCTGC TGAAGCTGCT CGACGGCGCC TGGGTGCCGC TGCTGTTCGG GCTGGCGATG 
GCCGTGGTGA TCTGGACCTG GCGGCGCGGC GTCGCGCTGC TGATGATCAA GTCACGTCGT 
GCCGAGGTGC CGCTCGACGA TCTGATCGGC AGCCTGGAGA AACACCCGCC GCACATCGTC 
AAGGGCACCG CGGTGTTTTT GACCGCCGAC GCCGAATTTG TCCCGCCGGC GCTGCTGCAC 
AATCTCAAGC ACAACAAGGT GCTGCACGAG CACAACGTGA TCCTGACGAT CGAGACGATG 
CACACCCCGC GGGTCGAAGC GGCCGACCGG ATCCGGCTGG TGAAGGTGAG CGAGAAGTTC 
AGCAAGGTGG CGTTGCGGTT CGGGTTCATG GAAACCCCGA ATGTGCCGAA GGCGCTGGTG 
CTGGCGCGCA AACTCGGCTG GGAGTTCGAC ATCATGTCGA CCTCGTTCTT TGTGTCGCGG 
CGCTCGCTGA AACCGGCCGC GCAATCCGAG ATGTGGCGGT GGCAGACCAA GCTGTTTGTC 
GCTCTTGCCA AGTCCGCCAA CGACGCCACC GACTATTTCC AGATCCCGAC CGGCCGGGTG 
GTCGAGGTCG GCGCGCAGGT CACCATCTAG 

 

Protein sequence

MAPSAATTEA PEQTGFWALT LGGIGVVFGD IGTSPLYAFR EAVAGAAGGA PASRVLVLGV 
LSLILWALLI VVTAKYVLLL LRADNNGEGG TLSLMALGRR ALGRRSLFLL VLGVIGASMF 
IGDSMITPAI SVLSAIEGLK IAAPALEHYV VPLTVLVLVL LFGVQSHGTA IVARFFGPVM 
LVWFATLAAM GAMHIMDDPS VLAAINPWYA AQFLASHGTI GLVTLGAVFL AVTGGEALYA 
DLGHFGRRPI QTAWLGFVLP ALLINYFGQG ALVLSNPAAL ENPFYKMVPE ALVLPLTLMA 
TAATVIASQA VITGAFSLIS QAVQLGLLPR FEVRYTSETN AGQIYLPRVN ALLLTGVLLL 
VLLFQTSSRL ASAYGIAVST TMVVDGIMGF VVIWKLWRWS WPAAALVILP LVLVDAMFFS 
ANLLKLLDGA WVPLLFGLAM AVVIWTWRRG VALLMIKSRR AEVPLDDLIG SLEKHPPHIV 
KGTAVFLTAD AEFVPPALLH NLKHNKVLHE HNVILTIETM HTPRVEAADR IRLVKVSEKF 
SKVALRFGFM ETPNVPKALV LARKLGWEFD IMSTSFFVSR RSLKPAAQSE MWRWQTKLFV 
ALAKSANDAT DYFQIPTGRV VEVGAQVTI