Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_2215 |
Symbol | |
ID | 6409875 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 2402491 |
End bp | 2403126 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642712099 |
Product | hypothetical protein |
Protein accession | YP_001991211 |
Protein GI | 192290606 |
COG category | [R] General function prediction only |
COG ID | [COG1611] Predicted Rossmann fold nucleotide-binding protein |
TIGRFAM ID | [TIGR00725] conserved hypothetical protein, DprA/Smf-related, family 1 [TIGR00730] conserved hypothetical protein, DprA/Smf-related, family 2 |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.548761 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGACGCTGT CATCCCGCGG TGCCACATCC GCCACCATGA GCAAGATCAA GACCGTCTGC GTCTATTGCG GCTCCGGCCC CGGCAGCAAT CCCCGATTTC TCGAAGCAGC GACAGCCTTC GGCAAGGAAC TCGCCGAGCA CGGCGTCGGG CTGGTGTACG GCGGCGGCGC GATCGGGCTG ATGGGTGCGG TCGCCAACGC AGTGCTCGAT CACGGCGGCG CGGTTACCGG CATCATTCCA GGCTTTCTCA GCGCCAAGGA GATTGCGCTC GGTCGCGTCA GTGAGCTGAT CGTCACTGAA GACATGCACG AGCGGAAGCG GCTGATGTTC GAGCGATCCG ATGCCTTCGT AGCTTTACCA GGCGGCATCG GCACGCTCGA AGAACTCGTC GAGCAGATGA CCTGGCAGCA ACTTGGCCGT CACACCAAGC CGATCCTGAT CGCCGACATC GACGGTTTCT GGCAGCCGCT ACTCGAACTC TTGGCACACA TGCGCAGCAC CGCCTTCATC CGCCCCAACC TGGCGGTCGA GATTCTGAAG GCGGACAAGG TCGAAGACAT CCTGCCGAAG CTGCAAGCTG CCGCAGCGCC GCAGCCGGCG CGTGAGATGC CGCCGGGGAT TGCGGAACGG CTGTAG
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Protein sequence | MTLSSRGATS ATMSKIKTVC VYCGSGPGSN PRFLEAATAF GKELAEHGVG LVYGGGAIGL MGAVANAVLD HGGAVTGIIP GFLSAKEIAL GRVSELIVTE DMHERKRLMF ERSDAFVALP GGIGTLEELV EQMTWQQLGR HTKPILIADI DGFWQPLLEL LAHMRSTAFI RPNLAVEILK ADKVEDILPK LQAAAAPQPA REMPPGIAER L
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