Gene Rpal_2215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_2215 
Symbol 
ID6409875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp2402491 
End bp2403126 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content64% 
IMG OID642712099 
Producthypothetical protein 
Protein accessionYP_001991211 
Protein GI192290606 
COG category[R] General function prediction only 
COG ID[COG1611] Predicted Rossmann fold nucleotide-binding protein 
TIGRFAM ID[TIGR00725] conserved hypothetical protein, DprA/Smf-related, family 1
[TIGR00730] conserved hypothetical protein, DprA/Smf-related, family 2 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.548761 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGACGCTGT CATCCCGCGG TGCCACATCC GCCACCATGA GCAAGATCAA GACCGTCTGC 
GTCTATTGCG GCTCCGGCCC CGGCAGCAAT CCCCGATTTC TCGAAGCAGC GACAGCCTTC
GGCAAGGAAC TCGCCGAGCA CGGCGTCGGG CTGGTGTACG GCGGCGGCGC GATCGGGCTG
ATGGGTGCGG TCGCCAACGC AGTGCTCGAT CACGGCGGCG CGGTTACCGG CATCATTCCA
GGCTTTCTCA GCGCCAAGGA GATTGCGCTC GGTCGCGTCA GTGAGCTGAT CGTCACTGAA
GACATGCACG AGCGGAAGCG GCTGATGTTC GAGCGATCCG ATGCCTTCGT AGCTTTACCA
GGCGGCATCG GCACGCTCGA AGAACTCGTC GAGCAGATGA CCTGGCAGCA ACTTGGCCGT
CACACCAAGC CGATCCTGAT CGCCGACATC GACGGTTTCT GGCAGCCGCT ACTCGAACTC
TTGGCACACA TGCGCAGCAC CGCCTTCATC CGCCCCAACC TGGCGGTCGA GATTCTGAAG
GCGGACAAGG TCGAAGACAT CCTGCCGAAG CTGCAAGCTG CCGCAGCGCC GCAGCCGGCG
CGTGAGATGC CGCCGGGGAT TGCGGAACGG CTGTAG
 
Protein sequence
MTLSSRGATS ATMSKIKTVC VYCGSGPGSN PRFLEAATAF GKELAEHGVG LVYGGGAIGL 
MGAVANAVLD HGGAVTGIIP GFLSAKEIAL GRVSELIVTE DMHERKRLMF ERSDAFVALP
GGIGTLEELV EQMTWQQLGR HTKPILIADI DGFWQPLLEL LAHMRSTAFI RPNLAVEILK
ADKVEDILPK LQAAAAPQPA REMPPGIAER L