| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2204 |
|---|
| Symbol | |
|---|
| ID | 6409864 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | - |
|---|
| Start bp | 2389632 |
|---|
| End bp | 2390042 |
|---|
| Gene Length | 411 bp |
|---|
| Protein Length | 136 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642712088 |
|---|
| Product | PilT protein domain protein |
|---|
| Protein accession | YP_001991200 |
|---|
| Protein GI | 192290595 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1487] Predicted nucleic acid-binding protein, contains PIN domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGGCT GGATGCTCGA TACCAACGTC GCCAGCCATG TCATCAGGGG CGACCGGCGC
GAGATCATCG AGCGGCTAGT CGCTTTGCCG ATCTCGGACG TCGTCATCTC ATCGATCACA
GAAGGTGAAC TCCTCTACGG CCTGGCTAAG CGCGGCTATC CCACCGCGTT ATCCGAACGC
GTCCGAGAAT TTCTACTCCG CGTCGACGTC CTACCGTGGG ATCACGAGGT GACGAAGACT
TACGCCGACC TGCGCGCAGT CTGCGAAGCC AAAGGCGTCA CACTCTCTCC TCTCGACATG
ATGATCGCTG CCCATGCCGC TGCGACAAAC GCAACGTTGG TCACGCGCGA CAAGGCCTTC
AGCCGCGTGC CTTCACCATT GCGGATCGAG GACTGGGCAG AGATGAGTTG A
|
|---|
| Protein sequence | MSGWMLDTNV ASHVIRGDRR EIIERLVALP ISDVVISSIT EGELLYGLAK RGYPTALSER
VREFLLRVDV LPWDHEVTKT YADLRAVCEA KGVTLSPLDM MIAAHAAATN ATLVTRDKAF
SRVPSPLRIE DWAEMS
|
|---|
| |