Gene Rpal_2169 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_2169 
Symbol 
ID6409829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand- 
Start bp2348089 
End bp2348712 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content63% 
IMG OID642712053 
Producttranscriptional regulator, TetR family 
Protein accessionYP_001991165 
Protein GI192290560 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.821962 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGCCTG CCGTCACCAA ACGCGCCCGC CGCAAAGCCG AGCGCCCCTC GGAAATCCTC 
GACGCCGCGT TCGAGGAATT CGTCGTGCAC GGCTATGCGG CGACCCGTCT CGAAGACGTC 
GCGGCGCGTG CCGGCGTGAC CAAGGGCACC ATCTATTTTT ACTTCGACAC CAAGGAACGG 
GTGTTCGAAG AAATGGTCCG GCACAAATCG CAATCGTTTC TGCCGGGCCT GAAGGACTAT 
GCGCTCACCC TCCCCGGCTC GGCCACCGAA CGGCTGCGCG GCTTGATCGC CTTCACCTAT 
GGCCACATTG CGGAGAACCG CGAGTCGCGC GAAATCCTGC GCTTCCTGAT CGCCGAGGGC 
GGCCGCTTCC CCGATCTGGT CGATCGCCAC CACGACGAAT TTGTGGCGCC GATCATCGAT 
CAGTTCAGGG AAGTCATCGA ACAAGGCGTC GCCGCCGGTG AATTCCGCGA TGCGCCCGCG 
GCCGGCTTCA CCGAGATCGT GATGAGTCCG GCGGTGTTGC TCAGCCTGTG GTCGCTGCTG 
TTTGGTACCC GTAAAGAAGT CGATTTCGCT GCCTTCACCG AAGCCAGCGT CGATCTGCTG 
CTGCGCGGTC TGGTGAAACG TTGA
 
Protein sequence
MPPAVTKRAR RKAERPSEIL DAAFEEFVVH GYAATRLEDV AARAGVTKGT IYFYFDTKER 
VFEEMVRHKS QSFLPGLKDY ALTLPGSATE RLRGLIAFTY GHIAENRESR EILRFLIAEG 
GRFPDLVDRH HDEFVAPIID QFREVIEQGV AAGEFRDAPA AGFTEIVMSP AVLLSLWSLL 
FGTRKEVDFA AFTEASVDLL LRGLVKR