| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2148 |
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| Symbol | |
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| ID | 6409808 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 2324204 |
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| End bp | 2326513 |
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| Gene Length | 2310 bp |
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| Protein Length | 769 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642712032 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_001991144 |
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| Protein GI | 192290539 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGCGCG TGCAGGCAGC GGACGCCTGC GCTCAATCCG ATTCAATCAA AGGATTGGCG
CAGTCGATCG CTAAACCCGC CTATCATCGG CTGTTGAATG CAGAACCGGT GTTGCGGCGC
GCGGTGCCTT TGCTGATCAT CGCATTTCTG GTCACCATCT TCTTCGGTGC CGCTGTTCAG
ATCATCGAGC AGAGCAAGCA GAAGCGCGGT GCGATGAACC GCGACCTCAG CGCGCTCGCC
GATCTGATCG CCGAACGTCT CGAACATATC GGCGTCGTCC GGCTCGACCG CCCCGCCTCG
ATCGAACGCC TGCAGAATCT GTTGCCGGGC CTGATCCCGA CTTGGGGTAT TGCGCCGGGG
CGGCACGTCA TCGTCACCAG CGCCGATCAG CGAATTCTCG CGCGCGTGCC GATCGGCACC
GAACCGAGCG TCGACAACCG CTTTCTCGAA ATCCTGGGCG CAGCGTCGCT GACCAAATCA
GGTCAGCAGA GCAGCATCAG CGAAATCACC CTGCCAGGCG GCGCTTCCGC GCTGGCCACG
ATGCACGTGG TGAAGTCGCT GCCCGGTCAG GTCGTCATCA TCCAGGAAGA CACCGGCTCG
CTGCTCCGAT CGGACACCGC GCTGCAGGTG ACGCTGTCGG CGACCACCGG CTTCGTGGTG
CTGATCCTCG GCTTCGCCTT CCATTGGCAA TCGACCCGCG CCCGCGAGGG CGACCTGATC
AACGACGCCG TGCGCAGCCG GATCGACACC GCGCTTAATC GCGGCCGCTG CGGGCTGTGG
GACTGGGACC TCAGCCGCGG CCGGATCTTC TGGTCGCAAT CGATGTTCAC GATCCTCGGC
CTGGAAAGCC GCAACGACCT CCTCACCTTC GGTGAGGTCA ATGCGCTGGT GAAGGGCGAG
GACATCGACC TGTTCGCGAT CGCCGACGAA CTGATGGCCG GCCGCGTCGA TCACATCGAC
CACAGCTTCC AGATGCGTCA CGCCCACGGC CACTGGATCT GGCTGCGGAT GCGCTGCGAA
CTGACCCAAG AGGCCGGCGC AACCGAGAAG CACCTGATCG GCATCGCGGT CGATATCACC
GAACAGAAGA GCCTTGCCGA GCGTTCGGTC GAAGCCGATC TGCGCCTGCG CGACGCGATC
GAGACCATCC CGGAAGCCTT CGTGCTGTGG GACGCCGAGA ACCGGCTGGT GCTGTGCAAT
TCGCACTTCC AGCGCCTGCA CAAATTGCCG GACTCGGCGG TGACGCCCGG CACCTCGTAC
GAGACCATTC TCGAAGTCGG CCGGATGCCG CAGCTTCGCA CCCGGCTGTG CGACAACGGC
GCGGTGATGC CCGGCGCCCG CACCTTCGAG GCGCAGCTCG ACGACGGCAG CTGGCTGCAC
ATCAGCGAGC GCCGCACCAA GGACGGCGGC TACGTCGCAG TCGGCACCGA CATCACCAGG
ATCAAGGCGC ACGAACAGAA GCTGGTCGAC AACGACCTGC GTCTGCGCGC CACCGTCGCC
GATCTCAAGA TCACGCAGTC GAAGCTGGAG AAGCAGGCGC TCGAACTCGC CGATCTCGCC
CGCAAATATG CCGACGAAAA ACGGCGGGCC GAGGAAGCCA ATCAGACCAA GTCGAAATTC
CTGGCCAATA TGAGCCACGA GCTGCGCACG CCACTCAACG CCATCATCGG CTTCTCGGAG
ATCATGGGCA GCGGCATGTT CGGCACGCTG GGCTCGGAGA AGTATCAGGA ATACTGCCAC
GACATCATGA CCAGCGGTCA CTATCTGCTG GAGGTGATCA ACGACATTCT CGACATGTCG
AAGATCGAAG CCGGACGGAT GCGGCTGGAG ATGGAGCCGC TCGATCTCGC CAAGACCATC
GGCGAGTCGG TCAAAGTCGT CGCCGGCCGC GCCGAGCATA AGCACCTCGA GCTGCGCTCC
GAGCTGAACG ACCAGATTCC GATCGTCGCC GACCGCCGCG CCATCAAACA GATCCTGATC
AACCTGCTGT CGAACGCGGT GAAATTCACC CCCGACGCCG GCCGCGTCAC CGTGCGCGGT
CACGTCGCCG GCGGCTCGAT CGTGCTGATG ATCGCCGACA CCGGCATCGG CATTCCGCCG
CAATCGCTGC GCCGTCTCGG CCAGCCGTTC GAGCAGGTCG AGAGCCAGCT TACCAAGAGC
TATCACGGCT CGGGCCTCGG CCTCGCCATC GCCAAGTCGC TGGTCAATCT GCACGGCGGC
TCGATGCGTC TGCGCTCCAC CCTCGGCGCC GGCACCGTCG TGATGGTGAG CCTGCCCCGC
ACCTGCCAGC AGCGCCCCCT CGCCGCCTGA
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| Protein sequence | MARVQAADAC AQSDSIKGLA QSIAKPAYHR LLNAEPVLRR AVPLLIIAFL VTIFFGAAVQ
IIEQSKQKRG AMNRDLSALA DLIAERLEHI GVVRLDRPAS IERLQNLLPG LIPTWGIAPG
RHVIVTSADQ RILARVPIGT EPSVDNRFLE ILGAASLTKS GQQSSISEIT LPGGASALAT
MHVVKSLPGQ VVIIQEDTGS LLRSDTALQV TLSATTGFVV LILGFAFHWQ STRAREGDLI
NDAVRSRIDT ALNRGRCGLW DWDLSRGRIF WSQSMFTILG LESRNDLLTF GEVNALVKGE
DIDLFAIADE LMAGRVDHID HSFQMRHAHG HWIWLRMRCE LTQEAGATEK HLIGIAVDIT
EQKSLAERSV EADLRLRDAI ETIPEAFVLW DAENRLVLCN SHFQRLHKLP DSAVTPGTSY
ETILEVGRMP QLRTRLCDNG AVMPGARTFE AQLDDGSWLH ISERRTKDGG YVAVGTDITR
IKAHEQKLVD NDLRLRATVA DLKITQSKLE KQALELADLA RKYADEKRRA EEANQTKSKF
LANMSHELRT PLNAIIGFSE IMGSGMFGTL GSEKYQEYCH DIMTSGHYLL EVINDILDMS
KIEAGRMRLE MEPLDLAKTI GESVKVVAGR AEHKHLELRS ELNDQIPIVA DRRAIKQILI
NLLSNAVKFT PDAGRVTVRG HVAGGSIVLM IADTGIGIPP QSLRRLGQPF EQVESQLTKS
YHGSGLGLAI AKSLVNLHGG SMRLRSTLGA GTVVMVSLPR TCQQRPLAA
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