Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_2137 |
Symbol | |
ID | 6409797 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 2307074 |
End bp | 2307925 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642712021 |
Product | helix-turn-helix domain protein |
Protein accession | YP_001991133 |
Protein GI | 192290528 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.291672 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGATA CGCTGGATCA TCGGCTGGAT CGCACGCGCG CCGAACTGGC GGATTTCTTA CGGCGGCGGC GGGAAGGCCT TTCACCGCTC GATGTCGGTC TGCCGGTCGG GAAACGGCGG CGGACGCCGG GGCTTCGCCG CGAGGAAGTC GCCGCCCTCG CGGGCGTCGG CCTCACCTGG TACACGTGGC TGGAACAGGG CCGTGCCATC AAGGTTTCGA CGGCCTTTCT CGACAATGTG TCCCGCGTCC TGAAGCTGGA TGAAATCGAG CGGCGGCATC TGTTTCTGCT CGCCCATCAG CGGCCGCCTG CAATGGCGGG ACAGGCTTGG TGCGAGCTGC CGCCGCTGGT GCGCCGATTG CTCGACGATC TCACTCTGCG CCCATCCTAT GTGCTGAACC TGCGATGGGA TGTGATCGGC TGGAATGATG CAGCCGAACG TCTGTTCGGG TTCGAGCAGC GCGATCCTGC CGAATGCAAT ATGCTCTGGA TGCTGTTCGC GGACGATCGG CTGAACGGCA GGATCGTGGA ATGGTCGGTT CAGGCTCCGC AAATTCTGGC GAGCTTTCGG CGGGATTTTG CGCGGTCCCC CGAGGATGAA AGCATGGTGG CGCTCGTCGA GTCGCTGGAG CAGGTCTCGC CTTCCTTCAG AAAGCTCTGG AACCAGCACG ACGTGCATGG ACGCTGCGAA GGCCGCCGAA GCTTCATGAT CGACGGCCGG GGGCCGGTGG CGTTCGATCA TGCATCCTTC ATCGTCGATG AGGAAAAGCA CCTCCGCCTT GTGTTCTATG CGGCAGCGGA TCACGGAGAT GTTGCAGCAG CTCTTCACGC TGGAAGAAGC CGGCCCCTAT AG
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Protein sequence | MSDTLDHRLD RTRAELADFL RRRREGLSPL DVGLPVGKRR RTPGLRREEV AALAGVGLTW YTWLEQGRAI KVSTAFLDNV SRVLKLDEIE RRHLFLLAHQ RPPAMAGQAW CELPPLVRRL LDDLTLRPSY VLNLRWDVIG WNDAAERLFG FEQRDPAECN MLWMLFADDR LNGRIVEWSV QAPQILASFR RDFARSPEDE SMVALVESLE QVSPSFRKLW NQHDVHGRCE GRRSFMIDGR GPVAFDHASF IVDEEKHLRL VFYAAADHGD VAAALHAGRS RPL
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