| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2126 |
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| Symbol | |
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| ID | 6409786 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 2294702 |
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| End bp | 2295376 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642712011 |
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| Product | two component transcriptional regulator, winged helix family |
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| Protein accession | YP_001991123 |
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| Protein GI | 192290518 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.245988 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGCGTCTGC TCGTCGTCGA AGATGACCCC GATCTCAACC GCCAGCTCAC CACCGCGCTG
ACCGATGCCG GTTACGTGGT CGACCGCGCC TTCGATGGCG AGGAGGGGCA TTTCCTCGGC
GACACCGAGC CGTACGACGC CGTCGTGCTC GACATCGGCC TGCCGAAGAT GGATGGCATC
TCGGTGCTGG AGGCGTGGCG GCGAAACAGC CGCGCGATGC CGGTGCTGAT CCTCACCGCG
CGCGACCGCT GGAGCGACAA GGTGCAGGGC TTCGACGCCG GCGCCGATGA TTACGTCGCC
AAGCCATTCC ATCTCGAGGA AGTGCTGGCG CGGATCCGCG CGCTGCTGCG GCGGAGTGCC
GGCCATGCGC AATCCGAGCT GACCTGCGGC CCGGTGGTGC TCGACACCCG CACCGGCCGG
GTCAGCGTCA GCGGCAATCC GGTGAAGCTG ACCAGCCACG AATATCGTCT GCTGGCCTAT
CTGATGCACC ACTCCGGCCG GGTGGTGTCG CGCACCGAGC TGGTCGAGCA TCTGTACGAT
CAGGATTTCG ACCGCGACAG CAACACCATC GAGGTGTTCG TCGGCCGCAT CCGCAAGAAG
CTCGGCGTCG ACATCATCCA GACCGTGCGC GGGCTCGGCT ATCTGCTGTC GCCGCCGGCC
GCGGACGCGC ATTAG
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| Protein sequence | MRLLVVEDDP DLNRQLTTAL TDAGYVVDRA FDGEEGHFLG DTEPYDAVVL DIGLPKMDGI
SVLEAWRRNS RAMPVLILTA RDRWSDKVQG FDAGADDYVA KPFHLEEVLA RIRALLRRSA
GHAQSELTCG PVVLDTRTGR VSVSGNPVKL TSHEYRLLAY LMHHSGRVVS RTELVEHLYD
QDFDRDSNTI EVFVGRIRKK LGVDIIQTVR GLGYLLSPPA ADAH
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