Gene Rpal_2117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_2117 
Symbol 
ID6409777 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp2285050 
End bp2285475 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content65% 
IMG OID642712002 
Productglutathione-dependent formaldehyde-activating GFA 
Protein accessionYP_001991114 
Protein GI192290509 
COG category[S] Function unknown 
COG ID[COG3791] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0449559 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCACG ACAGCAACGT GCGGAGCGGC GGGTGCCACT GCAGGGCGGT GCGCTTCGAG 
GTGACGCTGA GCGACGGCTT CGACTCGATC CGGCGCTGCA CCTGTTCGTA TTGCCGGATG
CGCGGCGCGG TCGTCGCGAT GGCCGAGATG GGCGGGATCA AGATCCTGCA GGGCGAAGAG
GTGCTGACGA CCTATCGCTT CCACACCCGC GCGGCGCAGC ATTTCTTCTG CTCACGCTGC
GGCATCTACA CTCATCATCA GCGGCGATCC AATCAGAACC TCTACGCCGT CAACGTCGCC
TGCCTCGACG GCGTCAGCCC GTTCGATTTC GCCGAGGTGC CAGTGATGGA CGGCATCAAT
CACACCAACG ACACCGGCCA GCCGACCCGC CGCGCCGGCA CGCTGCGCTT CATCGCTTCG
GAGTGA
 
Protein sequence
MDHDSNVRSG GCHCRAVRFE VTLSDGFDSI RRCTCSYCRM RGAVVAMAEM GGIKILQGEE 
VLTTYRFHTR AAQHFFCSRC GIYTHHQRRS NQNLYAVNVA CLDGVSPFDF AEVPVMDGIN
HTNDTGQPTR RAGTLRFIAS E