Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_2117 |
Symbol | |
ID | 6409777 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 2285050 |
End bp | 2285475 |
Gene Length | 426 bp |
Protein Length | 141 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642712002 |
Product | glutathione-dependent formaldehyde-activating GFA |
Protein accession | YP_001991114 |
Protein GI | 192290509 |
COG category | [S] Function unknown |
COG ID | [COG3791] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0449559 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATCACG ACAGCAACGT GCGGAGCGGC GGGTGCCACT GCAGGGCGGT GCGCTTCGAG GTGACGCTGA GCGACGGCTT CGACTCGATC CGGCGCTGCA CCTGTTCGTA TTGCCGGATG CGCGGCGCGG TCGTCGCGAT GGCCGAGATG GGCGGGATCA AGATCCTGCA GGGCGAAGAG GTGCTGACGA CCTATCGCTT CCACACCCGC GCGGCGCAGC ATTTCTTCTG CTCACGCTGC GGCATCTACA CTCATCATCA GCGGCGATCC AATCAGAACC TCTACGCCGT CAACGTCGCC TGCCTCGACG GCGTCAGCCC GTTCGATTTC GCCGAGGTGC CAGTGATGGA CGGCATCAAT CACACCAACG ACACCGGCCA GCCGACCCGC CGCGCCGGCA CGCTGCGCTT CATCGCTTCG GAGTGA
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Protein sequence | MDHDSNVRSG GCHCRAVRFE VTLSDGFDSI RRCTCSYCRM RGAVVAMAEM GGIKILQGEE VLTTYRFHTR AAQHFFCSRC GIYTHHQRRS NQNLYAVNVA CLDGVSPFDF AEVPVMDGIN HTNDTGQPTR RAGTLRFIAS E
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