| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2096 |
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| Symbol | |
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| ID | 6409756 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 2269153 |
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| End bp | 2270409 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 642711981 |
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| Product | phage major capsid protein, HK97 family |
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| Protein accession | YP_001991093 |
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| Protein GI | 192290488 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4653] Predicted phage phi-C31 gp36 major capsid-like protein |
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| TIGRFAM ID | [TIGR01554] phage major capsid protein, HK97 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.225363 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGACCA CGTTCGACCA TGCCCCCGAG ACCAAGGCCG GCTTTGCCGG CGACGATGCG
CAGCAGGTGT TCGATGCCTT GATGCGCGCG TTCGAGGACT ACAAGGCCGA GAACGACGCG
CGGCTGAAGG CGATCGAGAC CGGCAAGGGC GACGTGCTGG CCGAGGAGAA GCTGGCGCGG
ATCGACGCCG CGCTGGATCA TCAGCAGCGC CGGCTCGACG AGCTCGTCCT GAAGGCGGCG
CGGCCGCAGC TCGCCGCGGA GCGGACGCCG CCGGCCGCCG ATCAGCGCGA GCACAAGGGC
GCGTTCGAGG CCTATGTCCG CACCGGCGAG GCCGCCAGCC TGCGCCGGCT GGAGACCAAG
GCGCTGTCGG TGGGCTCCGA TCCCGACGGC GGCTATCTGG TGCCGACCGA GCTCGAGCGC
GCGATCTCGG CGCGGCTCGC CGCGATCTCG CCGATCCGTT CGCTCGCTAC CGTGCGCGAG
ATCTCCGGCG GGGTGTACAA GAAGCCGTTC GTGACCGCCG GGCCGGCGAC CGGCTGGGTC
GGCGAGAGTG ACGCCAGGCC GCAGACCAAT GCGCCGTCGC TCGATGCGCT GTCGTTTCCG
GCGATGGAGC TGTACGCGAT GCCGGCCGCG ACCGCGACGC TGCTCGACGA CTCTGCGGTG
AATATCGACG ACTGGCTCGC CGGCGAGATC GACCAGGCGT TCGCCGAGCA GGAGGGCATC
GCCTTCGTGT CCGGCGACGG CGTCGCTAAG CCGAAGGGCT TCCTCGCCGT GCCGACCGCG
GCCAACAGCG CCTGGAGCTG GGGCAAGCTC GGCACCATCT CGACCGGCGC CGCCGGCGCG
TTCGCCGCCA CCGCGCCCGG CGACGTGCTG ATCGACGTGA TCTACGCGCT GCGGCCGGGC
TATCGCCAGA ACGCCAGCTT CGTGATGAAC CGGCGGACGC AGGCGGCGAT CCGCAAGTTC
AAGGATTCCT CCGGCGCCTA TCTGTGGCAG CCGCCGGTCA CCGCCGGCGG CCGCGCCAGC
CTCGCCGGCT TCCCGCTCGC CGATGCCGAG GACATGCCGG ACATCGCGGC GAATTCGCTG
TCGATCGCGT TCGGCGACTT CCGCCGCGGC TATCTGATCG TCGATCGCCA GGGCGTGCGC
GTGCTGCGCG ATCCGTATTC GTCGAAGCCC TACGTGCTGT TCTACACCAC CAAGCGCGTC
GGCGGCGGCG TCCAGGATTT CGACGCCATC AAGCTGGTGA AGTTCGCCGC GAGCTGA
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| Protein sequence | MMTTFDHAPE TKAGFAGDDA QQVFDALMRA FEDYKAENDA RLKAIETGKG DVLAEEKLAR
IDAALDHQQR RLDELVLKAA RPQLAAERTP PAADQREHKG AFEAYVRTGE AASLRRLETK
ALSVGSDPDG GYLVPTELER AISARLAAIS PIRSLATVRE ISGGVYKKPF VTAGPATGWV
GESDARPQTN APSLDALSFP AMELYAMPAA TATLLDDSAV NIDDWLAGEI DQAFAEQEGI
AFVSGDGVAK PKGFLAVPTA ANSAWSWGKL GTISTGAAGA FAATAPGDVL IDVIYALRPG
YRQNASFVMN RRTQAAIRKF KDSSGAYLWQ PPVTAGGRAS LAGFPLADAE DMPDIAANSL
SIAFGDFRRG YLIVDRQGVR VLRDPYSSKP YVLFYTTKRV GGGVQDFDAI KLVKFAAS
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