| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2087 |
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| Symbol | |
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| ID | 6409747 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 2260566 |
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| End bp | 2261966 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642711972 |
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| Product | hypothetical protein |
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| Protein accession | YP_001991084 |
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| Protein GI | 192290479 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2358] TRAP-type uncharacterized transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.073016 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCATCCC CGGACGGTAG TGGCAGCGAG AGTTTCCGCA CGCGGCGGCG CCGTAATCGC
GCCCGTTTTG CACTGGCGGC GGTGCTAACC TTCATTCTGG TTGCGGTCGG CGTGCTCGCC
TTGGTGTTCT ACGAGTTACG ACCCGTCAGC CTGAAGATCG CTGTCGGGCC GGGAGGCGGC
GACGATCTGA AGCTGGTGCA AGCATTGGCC CAGAGTTTTG CGCGGGATCG CGCTGCCGTG
CGGCTGGTGC CATTGGTGAC CGGTGGGGCG ACGCCGAGCA TCGAGGCGTT TCGCGACCAC
AAGGCGGACC TCGCGGTCAC CCGGGCCGAT CTTGATCTGC CTGCCGACGC GCAGGCGGTG
GCGGTGCTGC GCAAGAACGT GGTGGTGCTG TGGGCGCCAT CGTCGGCCGG CAAGGGCAAG
AAGTCGATCA AGACCATCAC CGATCTGGCA GGCCGCCGGG TCGGCGTGAT TGGGCGGACG
CCGGCCAACG TCAAACTGTT CGACATCATT CTGGCCGAGT CCGGCGTCGC GCCCGACAAG
GTCCAGAAGG AGCAGTTCGC CACCGGCCAG CTCGCCGAGA TGGCGCGCGA TCCGTCGCTC
GACGCGTTTC TGGCGGTCGG GCCGCTCGAC AGCAAGATCA CCGGCGAAGC GATCGCCGCC
ACCGCGAAGG CGCGGGGCGA GCCGCGGTTC CTACCGGTCG ATGTTGGTGA TGCCATCGCC
AAGAAGTATC CGATCTACGA TTCCGAGGAG ATTCCGGGCA GCATCTTCTC CACCCAGCCG
GCGCGGCCCG AGGACAAGGT CGATACCGTC AGCGTCAACC ATCTGATCAT TGCTCGGCAG
TCGCTGTCCT CCGTGACGGT GACCAAGCTG ACGCGGCAGA TCTTCGCCGC CCGGCAGCAG
ATCGCCCGCG AGATGCCGCT CGCCGGCAAG ATCGAAGCGC CGGACACCGA GAAGGACGCG
GCGCTGCCGG CGCATCGCGG CGCCGCCGCG TTCATCGACG GCACCGACCG CACCTTCATG
GAGCGCAACA GCGATTACAT CTGGGGCTTG GTGCTGCTGC TGTCCGGCCT CGGCTCGGCC
GGCGCCTGGT TTCGCAGCTA TTTGACCCGC GACGAGCGGG AAGCCGGCGC CAAGATGCGC
GACCGCGCGC TCGCCATGGT GTCCAAGGCG CGGAAAGCGG AGACGCTGGA GGCGCTGGAC
GCGTTGCAGC ATGAGATCGA CAAGATCCTT CGTGACACGC TGGATTGCTA CGACGACGGT
GCGATCGAGG ATCTCGAGCC GTTCAGCCTG GTGCTGGAGC AGTTCCACCA CGCGGTGGTG
GACCGCCGTG CCGCGTTGAG CGCTTCCGGC CCGGGGCTGG TTCCGGCTGA TCCGGCGACA
CTGCCGGCCG CCCGCGCCTG A
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| Protein sequence | MASPDGSGSE SFRTRRRRNR ARFALAAVLT FILVAVGVLA LVFYELRPVS LKIAVGPGGG
DDLKLVQALA QSFARDRAAV RLVPLVTGGA TPSIEAFRDH KADLAVTRAD LDLPADAQAV
AVLRKNVVVL WAPSSAGKGK KSIKTITDLA GRRVGVIGRT PANVKLFDII LAESGVAPDK
VQKEQFATGQ LAEMARDPSL DAFLAVGPLD SKITGEAIAA TAKARGEPRF LPVDVGDAIA
KKYPIYDSEE IPGSIFSTQP ARPEDKVDTV SVNHLIIARQ SLSSVTVTKL TRQIFAARQQ
IAREMPLAGK IEAPDTEKDA ALPAHRGAAA FIDGTDRTFM ERNSDYIWGL VLLLSGLGSA
GAWFRSYLTR DEREAGAKMR DRALAMVSKA RKAETLEALD ALQHEIDKIL RDTLDCYDDG
AIEDLEPFSL VLEQFHHAVV DRRAALSASG PGLVPADPAT LPAARA
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