| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2007 |
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| Symbol | |
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| ID | 6409667 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 2175418 |
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| End bp | 2176371 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642711893 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_001991005 |
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| Protein GI | 192290400 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0894753 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCCGG AAATCGTCGT CCTCGGCTAC GGCCCGGTTG GCCGTGCCAC CGCCGAACTG
CTCGCTGCCA AAGGCGTCGC GGTACGTGTG GCGCAGCGAT CCCAACCCGC CGATCTTCCG
CGCGGTGCTG TGTTTCAAGC CTGCGACGTA CTGGACCCTG CCTCGGTCGC CGGTGCTGTC
GCGGGCGCCA AGCAGATCGT TGTCGCGATC GGTTTTCCCT ATATCGCTGA GGTGTGGCGT
ACCTCGTGGC CGGCGGCGAT GCAGAACCTG CTCGCGGCCG CTGCAGCGAC GCACGCGCGG
ATGGTGTTCG TCGATAACCT CTATATGTAC GGCGCGCAGC ACGCAGCGCT GCGCGAGGAC
ATGCCGCTGA CCGATGTCGG CGTGAAACCC GCGGTGCGCG CCGAGATCAC GCGGCTATGG
ACGAAGGCGA GCGCCGCCGG GCAAGTGCGC GTCGCAGCGC TGCGGGCGCC GGACTTCTAC
GGACCGGGCG TCGGGCTGTC GCATCTCGGC GACCTCGCAT TCGGCGCAAT CGCCAAGGGC
AAGCGAGCGA TGCTGATCGC TCCGCCCGAC ACGCCGCACG ACTTCGCCTA TGTGCCGGAT
ATCGCGCGGG CGGTGGCGAG CTTGCTTGAC GCTCCAGACG ACGCTTTCGG TCAGGCCTGG
CACATGCCGA GCGCGCCGAC CCGCACCCCG CGGCAGATCC TCGAACTCGG CGCCCCTGCA
CTCGGCACCA CGGTGCGGAT CTCGTCGCTG CCACAATGGC TGCTGCCGGT GGTTGGAGCG
GTGTCGCCGA TGCTGCGGGA GATGACCGAG ATGCGGTTCC TATGGGATCG TCCATATCAG
GTCGATGCGC GGAAATTCAC GAACCGGTTC TGGTCGGACG TCACGCCGTT CGAGATCGGC
GCTGCGGCGA CCGCGCTGTC GTTCCGCGAC CAGGCGAGCA CGCTGGCGGC GTGA
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| Protein sequence | MTPEIVVLGY GPVGRATAEL LAAKGVAVRV AQRSQPADLP RGAVFQACDV LDPASVAGAV
AGAKQIVVAI GFPYIAEVWR TSWPAAMQNL LAAAAATHAR MVFVDNLYMY GAQHAALRED
MPLTDVGVKP AVRAEITRLW TKASAAGQVR VAALRAPDFY GPGVGLSHLG DLAFGAIAKG
KRAMLIAPPD TPHDFAYVPD IARAVASLLD APDDAFGQAW HMPSAPTRTP RQILELGAPA
LGTTVRISSL PQWLLPVVGA VSPMLREMTE MRFLWDRPYQ VDARKFTNRF WSDVTPFEIG
AAATALSFRD QASTLAA
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