| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2002 |
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| Symbol | |
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| ID | 6409662 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 2166398 |
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| End bp | 2167885 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642711888 |
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| Product | phage SPO1 DNA polymerase-related protein |
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| Protein accession | YP_001991000 |
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| Protein GI | 192290395 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1573] Uracil-DNA glycosylase |
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| TIGRFAM ID | [TIGR00758] uracil-DNA glycosylase, family 4 |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.515023 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCGCA TCCGGCTCGA CAGCGACACC GACTTCGACG GCTGGCGCAA GGCGGCGCGG
GAGCTGGTGC TGGCGGACGT GGCACCGGCG GATGTGACCT GGACGGTGGC GGGCGACGAG
CCGGAGCTGT TCGACGCGCC AGGGCGGGCG CCGGATGCTG GGTCCTTTGC TGAAACGGCC
GCGCCGTTCA TTCATCCTGC ACAATCCCCC TCCCCCGCGC AGACCTTCAA CGTCCCTGCC
CGCTTCGTCG AGCTGGCGCA CATTGCCATC CTGCATCGCG ATCCGCAGCG CTTTGCGTAC
CTGTATCAGC TGCTGTGGCG GCTCCGCGCC AATCCCGAGC TGATGCAGGT GGCAACCGAT
CCGGACGTGG CACGGCCACA GGCAATGGCC AAGGCGGTAA GGCGCGACGA ACACAAGATG
CACGCCTTCG TTCGCTTCCG CGAGATCGGC CGCGAGCCGA AGTCGCGTTA CGTCGCCTGG
TTCGAGCCCG AGCATCATAT CGTCGAGCTC GCCGCGCCTT TCTTCGCACG GCGCTTCGCC
GATATGGAAT GGTCGATCCT GACACCCGAC GTCTGCGCAC ATTGGGACGG CCACGCGATC
GCAATCACGC CCGGCGTCAG CAAGGCAATG GCGCCGTCGG AGGATCGGCT GGAGGAAACC
TGGCTGACTT ACTACGCCAG TATCTTCAAT CCGGCGCGGC TGAAGACCAA GGCGATGCAG
GCCGAAATGC CGAAGAAATA TTGGCGCAAT CTGCCCGAAG CGGCGCTGAT CAAACCGCTG
ATCGAACACG CCGAGCGCAA GGCGCATGCG ATGGTCGCGG CCGAGGCGAC CGCGCCGAGG
AAACCGCAGC GACAGGAGCC GCCGATGACG AGAGCCGAGC CGAAGGCCGA CACGCTGGCG
CATCTGCGCG AGGAAGCGAA AGATTGCCGC GCCTGCGACC TGTGGAAGGA CGCCACCCAG
ACCGTGTTCG GCGAAGGCCC GCAGCACGCC ACCGTGATGC TGGTCGGCGA GCAGCCCGGC
GACAAGGAAG ACCTCGCCGG CAAGCCGTTC GTCGGCCCCG CCGGCCAGAT GCTCGACCGC
GCACTGGCGG AGGCCGGCGT CGACCGCAGC AAGACCTACG TCACCAACGC GGTGAAGCAC
TTCAAATTCG TGCCGCGTGG CAAGATCCGC CTGCACCAGA AGCCGGCCAC GCCGGAGATT
AAGGCTTGCC GGCAGTGGTA CGAGCGCGAG CTCGCCGCGG TGCAGCCGCT GCTGGTGGTG
GCGATGGGCG CCACCGCGGC GCAGAGCGTG CTCGGCAGGA TCACCCCCAT CAACAAAACC
CGCGGCCGCC TGATCGACCG CGACGACGGT CCGCAAGTGC TGGTCACCGT CCACCCGTCC
TACTTGCTGC GGCTGCCCGA CGCCGACGCC AAGGCGCGCG AATACGCTCG CTTCGTCGAA
GATCTGAAGC TCATCGCCGC ACATCTGAAG AAGGCGCATG CGGCGTAG
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| Protein sequence | MNRIRLDSDT DFDGWRKAAR ELVLADVAPA DVTWTVAGDE PELFDAPGRA PDAGSFAETA
APFIHPAQSP SPAQTFNVPA RFVELAHIAI LHRDPQRFAY LYQLLWRLRA NPELMQVATD
PDVARPQAMA KAVRRDEHKM HAFVRFREIG REPKSRYVAW FEPEHHIVEL AAPFFARRFA
DMEWSILTPD VCAHWDGHAI AITPGVSKAM APSEDRLEET WLTYYASIFN PARLKTKAMQ
AEMPKKYWRN LPEAALIKPL IEHAERKAHA MVAAEATAPR KPQRQEPPMT RAEPKADTLA
HLREEAKDCR ACDLWKDATQ TVFGEGPQHA TVMLVGEQPG DKEDLAGKPF VGPAGQMLDR
ALAEAGVDRS KTYVTNAVKH FKFVPRGKIR LHQKPATPEI KACRQWYERE LAAVQPLLVV
AMGATAAQSV LGRITPINKT RGRLIDRDDG PQVLVTVHPS YLLRLPDADA KAREYARFVE
DLKLIAAHLK KAHAA
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