Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_1997 |
Symbol | |
ID | 6409657 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 2159141 |
End bp | 2160871 |
Gene Length | 1731 bp |
Protein Length | 576 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642711883 |
Product | sodium/hydrogen exchanger |
Protein accession | YP_001990995 |
Protein GI | 192290390 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4651] Kef-type K+ transport system, predicted NAD-binding component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCACGAAC TGATTGGCGA TATCACGCTG AGCATCCTGT TCGCCTGGCT GCTCGGACTG GCGGCGCATT TTTTCCGTCA GCCATTGATC CTCGCCTACC TTATCGGCGG TTTCGTCATC GGTCCATTCG GCCTTGGCTG GGTGAAATCC GAGAACTCGA TCTCGGTGAT CTCCGAGCTC GGGCTGATCT TCATGCTGTT CATGATCGGT CTCGAGATCG ATCTGAAGAA GATCATCCGG GCTGGTCCCG TTATCCTGGT GGCGGCCGGC GGACAGATCG CCGGCGGCGT GCTGCTCGGC CTCGCCTTCT TCGTCGGCAT CGGCCTTAGT CTCGGCGGCG GCCATTTTGA CGCGCTGTAT CTGACGGTGG CGTGCGCGCT GTCCTCCACC GTGATCATCG TCAAGGTGCT GTACGAGAAG CGCGAGCTCG ACACCCTGCC CGGCCGCATC ACGCTCGGCA TCCTGGTGCT GCAGGACATC TTCGCGATCC TGTTCTTGGC GGTGCAGCCA AGTCTCGCCG ACCTGCAGAT CTCGGTGCTG CTGCTGTCGA TCGCGCGGGT CGTCGCGCTG GTCGCCACTG CGCTGGCGCT GTCGCGCTAC GTGCTGCCCT GGCTGTTTCA CCGCATTGCC CGCACGCCCG AACTGGTGCT TCTCGGCGCA TTGGCGTGGT GCTTCCTGAT CGGCGAAATC GCCGAGCGGC TGCATCTGTC GCGCGAGATG GGCGCACTGG TCGCCGGCGT GTCGCTGTCG ACCTTCCCCT ACGCGCTCGA CGTCACCGCC AAGGTGACGA CGCTGCGGGA CTTCTTCATC ACGCTGTTCT TCGTCGCGCT CGGCATGACG ATCCCGATCC CGAACGGCTC GGTGATCGGA CTGGCGCTGG CGATCGCGGT ATTCACGCTG GCGAGCCGGC TGCTCACCAC CTTCCTGCCG CTGTATCTGA TGAAGCAGGG CCTGCGTGCC AGCCTGCTGC CGGCGCTGAA CCTGGCGCAG ATCAGCGAGT TCTCGCTGGT GGTGATCCAG ACCGGCGTCG CCGCCGGACA TATCGGCACC CAGACCGCGA GCGCGGCGTC GTTCGCTTTC GTGCTCCTGG CGGTGCTGTC GACCTTCGTG ATCATGCGCA GCGATCCGAT CACCCGCCGC GCGATCGGGA CACTGACCAA ATTCGGCTTC CGTGATCTCG GCCAGCAGCA GAGCGGCGCC GAGGCCGCCG CCGAGGCTGG CCATGGCGCG GTGCATCGCA TCGTGATCCT GGGCTTCTTC CGCGCCGCCA GCGCGCTGGT CAGCGAGATC GAGCAGCACA CCCCGGAGCT GCTCAAGCAG ATCAGCGTGA TCGACTTCAA CCCGATGGTG TATCGCACCC TCACCGAGCG TGGCATGCAC GTGATCTACG GCGATATCAG CAACGTCGAC ACGCTGCTGC ACGCCGGCGT CGCCAAGGCC GAGATCATCA TTCTCAGCGT GCCGGACTCG CTGCTGAAGG GCGCCACCAA CGAACGGCTG GTGCGCCACG TCCGCGCGCT CAATCCCAAC GCACAGATCG TCGCAACCGC CGACCTGCTC GCCGATGTCG AGGCGATGTA TCAGGCGGGT GCGGACTACG TCACCGTCAC CCGGCTGGCC GACGCCCGCG AGCTGTTCGA AGTGATCGAA GCCGCCGACA ATGGCCTGCT GTCCGATAAG CGCGCCGCCC TCGACGCCCG TCTCGCCGAG CGCCGGGAAG TATTGCCGTA A
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Protein sequence | MHELIGDITL SILFAWLLGL AAHFFRQPLI LAYLIGGFVI GPFGLGWVKS ENSISVISEL GLIFMLFMIG LEIDLKKIIR AGPVILVAAG GQIAGGVLLG LAFFVGIGLS LGGGHFDALY LTVACALSST VIIVKVLYEK RELDTLPGRI TLGILVLQDI FAILFLAVQP SLADLQISVL LLSIARVVAL VATALALSRY VLPWLFHRIA RTPELVLLGA LAWCFLIGEI AERLHLSREM GALVAGVSLS TFPYALDVTA KVTTLRDFFI TLFFVALGMT IPIPNGSVIG LALAIAVFTL ASRLLTTFLP LYLMKQGLRA SLLPALNLAQ ISEFSLVVIQ TGVAAGHIGT QTASAASFAF VLLAVLSTFV IMRSDPITRR AIGTLTKFGF RDLGQQQSGA EAAAEAGHGA VHRIVILGFF RAASALVSEI EQHTPELLKQ ISVIDFNPMV YRTLTERGMH VIYGDISNVD TLLHAGVAKA EIIILSVPDS LLKGATNERL VRHVRALNPN AQIVATADLL ADVEAMYQAG ADYVTVTRLA DARELFEVIE AADNGLLSDK RAALDARLAE RREVLP
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