Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_1969 |
Symbol | |
ID | 6409629 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 2127941 |
End bp | 2128831 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642711855 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_001990967 |
Protein GI | 192290362 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACACTCG AGCAGCTCCG CATCTTCATC GCGGTCGCCG AACAGCAGCA CATGACCCGC GCCGCAAGCG GACTGAACCT CACCCAATCG GCCACCAGCG CGGCGATCGC CGCGCTGGAA GCGCGTCACG GCGTCAAGCT GTTCGACCGC GTCGGGCGCG GCATCGTGCT CACGCAAGCC GGTCGCGACT TTCTCGGCGA GGCCCGCGCG GTGCTCGCCC GTGCCCGCGC CGCCGCACAG GCTCTCGACG ACATCGCCGG CCTGAAACGC GGTTCGCTCA GCGTCGCTGC CAGCCAGACC GCCGGCAATT ACTGGCTGCC GCAGCGGCTG CTGCGATTCC GGCAGCGTTA TCCCGGCATT GCGCTGCAAC TGACGATCAC CAACACCGAG CAGGTCGCCG CGATCATGCG CGAAGGTCGC GCCGATCTCG GCCTCATCGA AGGCGACGTC GACGACCCAC TGCTCAGCGC CACGCCGATC GGCGGCGACG ATCTGGTGAT CGTGGTCGGC CGCGACCATC CCTGGCGCTC ACTGCAACGC CTGACCGCCG CCAAGCTCAC CACCACCGGC TGGGTGCTGC GCGAACGCGG CTCCGGCACG CGCGCGATGT TCGAAGCCGC GCTGCAGCGC AGCGGACTTG CGCTGTCCGA TCTCGAGGTG CGCCTCGAAT TGCCGTCCAA CGAAGCAATC CGGGCTGCGG TCGAAAGCTC CGACTGCGCC ACCGCGATCT CCGGACTCGT CGCCGCGCCG TCACTCGCCG CCGGCACGTT GTATAGTCTG CGATTCGATC TGCCGCGTCG CGCATTTCAT CTTTTGCGAC ACAAGGAACA CAGCAGCAGT CAGGCTGAGA AAGCACTACT TGCTGAATTG TCGGCAACAT CTGCGAGCTA A
|
Protein sequence | MTLEQLRIFI AVAEQQHMTR AASGLNLTQS ATSAAIAALE ARHGVKLFDR VGRGIVLTQA GRDFLGEARA VLARARAAAQ ALDDIAGLKR GSLSVAASQT AGNYWLPQRL LRFRQRYPGI ALQLTITNTE QVAAIMREGR ADLGLIEGDV DDPLLSATPI GGDDLVIVVG RDHPWRSLQR LTAAKLTTTG WVLRERGSGT RAMFEAALQR SGLALSDLEV RLELPSNEAI RAAVESSDCA TAISGLVAAP SLAAGTLYSL RFDLPRRAFH LLRHKEHSSS QAEKALLAEL SATSAS
|
| |