Gene Rpal_1962 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_1962 
Symbol 
ID6409622 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp2117068 
End bp2117847 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content67% 
IMG OID642711848 
Productenoyl-CoA hydratase 
Protein accessionYP_001990960 
Protein GI192290355 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCTGC AATTCTCCAC CGTCACCCGC AAGGGGCCGA TCACCATCGT CACGCTGTCG 
CGGCCCGAAG TGTACAACGC GCTGCACACC GACGCGCATT TCGAACTCGA AGGCGTGTTC
AACGATTTCG CCGCCGATCC CGAGCAGTGG GTGGCGATCG TCACCGGCGC CGGCGACAAG
GCGTTCTGCG CCGGCAACGA TCTGAAGTGG CAGGCCTCCG GCGGCAAGCG CGGCTGGGGC
GAGAGCGGCT TCGGCGGCCT GACCTCGCGG TTCGATTGCG ACAAGCCGAT TATCGCTGCC
GTCAACGGCG TCGCGATGGG CGGCGGTTTC GAGATCGCGC TTGCCTGCGA TCTGATCATC
GCTGCGGAGA ACGCGACCTT CGCACTGCCG GAGCCGCGCG TCGGCCTCGC GGCGCTGGCC
GGCGGCCTGC ACCGCCTCCC CCGCCAGATC GGGCTGAAGC GCGCGATGGG CATGATCCTC
ACCGCCCGCC ACGTCAAGGC GCAGGAAGGC TATGAGCTCG GCTTCGTCAA CGAAGTCGTG
CCGCAAGGCC AGGCGCTCGC CGCGGCGGAA CGCTGGGCCG AAACCATCTG CACCGTCTCA
CCGATGTCGA TCCGCGCCTC GAAGCAGACG CTGTCGCGCG GCCTCGAAGT GTCACTGCCG
CAAGCGATCG CCGAGCAGCG CGACTACCCG GCAGTGAAAG CCATGGTCGC CTCGCAGGAC
TACATCGAAG GCCCGAAAGC GTTCTCCGAA AAGCGCAAGC CGAACTGGAG CGGGAAATAG
 
Protein sequence
MALQFSTVTR KGPITIVTLS RPEVYNALHT DAHFELEGVF NDFAADPEQW VAIVTGAGDK 
AFCAGNDLKW QASGGKRGWG ESGFGGLTSR FDCDKPIIAA VNGVAMGGGF EIALACDLII
AAENATFALP EPRVGLAALA GGLHRLPRQI GLKRAMGMIL TARHVKAQEG YELGFVNEVV
PQGQALAAAE RWAETICTVS PMSIRASKQT LSRGLEVSLP QAIAEQRDYP AVKAMVASQD
YIEGPKAFSE KRKPNWSGK