| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1950 |
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| Symbol | |
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| ID | 6409610 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 2103730 |
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| End bp | 2104716 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642711836 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_001990948 |
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| Protein GI | 192290343 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACAAGG CTCACCTCAA ACGCCGCCGC CGCGACCTGA TCGTCGCCGC TCTGCTCGCC
GCCGCCGCTG CCTGCGCGCC GTTGTTCATC AAGGACGTCT ACGTCCAGAA CATTATGGTG
CTGACCCTGA TGTATGCGGC ACTGTCGCAG GGGTGGAACA TCCTGGGCGG CTATTGCGGC
CAGATCTCGC TCGGCCACGC GCTGTATTTC GGCCTCGGCG CCTACACCAC GGCGCTGTTG
TTCACCAAGC TCGGCGTGCT GCCATGGTTC GGCATGATCG GAGGCGGCAT CATCTCGTCG
GTGATCGCCC TGGCGCTCGG CTATCCGACC TTCCGGCTGC GCGGCCACTA TTTCGTCATC
GCCACCATCG TGATCGCCGA GATTGGTTTT CTGTTGTTCC ACAATTGGGA CTGGGCCGGC
GCGGCTCTCG GCATCGACAT TCCGGTCCGT GGCGACAGCT GGGCCAAGTT CCAGTTCACC
CGCAGCAAGC TGCCTTACTA CTATTTCGCC CTGGTGTTCT GTTGCCTCGC CTGGCTCATC
ACCTGGTGGC TGGAAGACTC CAAATGGGGC TACTGGTGGC GCGCCGTGAA GGACAATCCG
GACGCGGCCG AAAGCCTCGG CGTGGTGGTG TTCAACTCCA AGATGGGCGC CGCCGCGGTA
TCGGCATTCC TCACTGCGGT CGGCGGCAGC TTCTACGCGA TGTTCGTGTC CTATATCGAT
CCTGAAAGCG TGATGACGTT CCAGTTCTCG TTGCTGATGG CGCTGCCCGC CGTGCTCGGT
GGCATCGGCA CGCTGTGGGG ACCGGTGCTC GGCGCTGCGA TCCTGATCCC GCTCACCGAG
CTGACGCGGT CGTTCGTCGG TGGCTCGGGA CGCGGCGTTG ACCTGATCCT GTACGGCAGC
GTGATCGTGG TGATCGCGCT GGCGCGGCCG GAAGGCTTGA TCGGCCTGTT CTCCCGCCGC
CCGGCTTCCA AGGGAGTGCC GCAATGA
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| Protein sequence | MDKAHLKRRR RDLIVAALLA AAAACAPLFI KDVYVQNIMV LTLMYAALSQ GWNILGGYCG
QISLGHALYF GLGAYTTALL FTKLGVLPWF GMIGGGIISS VIALALGYPT FRLRGHYFVI
ATIVIAEIGF LLFHNWDWAG AALGIDIPVR GDSWAKFQFT RSKLPYYYFA LVFCCLAWLI
TWWLEDSKWG YWWRAVKDNP DAAESLGVVV FNSKMGAAAV SAFLTAVGGS FYAMFVSYID
PESVMTFQFS LLMALPAVLG GIGTLWGPVL GAAILIPLTE LTRSFVGGSG RGVDLILYGS
VIVVIALARP EGLIGLFSRR PASKGVPQ
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