| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1936 |
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| Symbol | |
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| ID | 6409596 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 2087851 |
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| End bp | 2089227 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642711822 |
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| Product | beta-galactosidase |
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| Protein accession | YP_001990934 |
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| Protein GI | 192290329 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2723] Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase |
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| TIGRFAM ID | [TIGR03356] beta-galactosidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.111209 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCTCAT CGCTCATCCC TCCCGCCTCT GAGCCCGTGG CCGGTTTGCC GGTGTTGTCG
CACATCCGCA AAGACTTCAT CTGGGGCGTG TCGACCGCGA GCTTCCAGAT CGAAGGCGCC
GCCAACGAGG ACGGCCGCGG CCAGAGCATC TGGGACGTGT ATTGCCGCTC CGGCTATGTC
GCCAACAACG ACACCGGCGA TGTCGCTTGC GATCACTATC ATCGCTACCA GGAAGACGTC
GCGCTGATGA AGACGCTCGG CATTCAGGCG TATCGATTCT CGATCGCCTG GCCGCGGATC
TTCCCGCAAG GCACCGGCGC GATCAACGAG CCCGGCCTCG CCTTCTATGA TCGCCTGATT
GATGCGCTGG AGGCCGCCGG CATCGAGCCG TGGATCTGCC TGTATCATTG GGATCTGCCG
CAAGCGATGG AAGAGCGCGG CGGCTGGATG AATCGCGATA TCGTCGGCTG GTTCGCCGAC
TACGCGCGGG TGATCGGCGA GCGTTACGGC AAGCGCGTGA AGCGGTTTGC CACCTTCAAT
GAGCCCGGCA TCTTCAGCCT GTTCAGCCGC TCGTTCGGCG CGCGCGACCG CAGCGCCGAC
GAGAAGCTGC ACCGCTGGAT TCACCACGTC AATCTGGCGC ACGGCGCCGC CGTCGACGTG
CTGCGCGAGA CCGTGGCGGA TGCAAAGATC GGATTGGTCA CCAACTATCA GCCGGTGTAC
CCGTCGAGCG ACAAGCCGGA AGACGTCGCT GAGGCCAAGC TGATCAGCGA CTACTGGAAT
CGCGCTTTCG CCGATCCGCA ATATCGCGGT GAGTATCCAG GCCTGATCCG CGACGCCGTC
AAGCCGTATA TCCAGCCCGG CGACATGGAG CGCATCCACC GGCCGCTCGA CTGGTTCGGC
CTGAACCATT ACAGCCCCGT CTATATCAAC TCCGATCCGA ACGCGATCGT CGGACTCGGC
TGGGGGCCGA AGCCCGAGGG TATTCCGCGC TCGCCGATCG ACTGGACGAT CGAGCCGGAT
GCCTTCCGCG ATACGCTGAT CGAGATCAGC CGCCGCTACG GCAAGCCGGT TTACGTCACC
GAGAACGGTT ACGGCAGCAA TATCGAGAAG CCAGACGCCA ACGGCGAAGT GGTCGATCCT
GGCAGGATCG GCTTCCTGCG CGACTACATC ACCGCCCTCG ACCAGGCGGT CGCAGCCGGC
GCCGATGTGC GCGGCTACAT GGTGTGGTCG CTGCTCGACA ATTTCGAGTG GGAGTCCGGC
TACAGCGTGC GCTTTGGGCT GATCTACATC GACTATGCGA CGCTGCGCCG GATTCCGAAG
GCGTCGTTCA AGTGGTTCGC CGACGTGATC CGTCACGCCC GCGGCGCGAG CGCCTAA
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| Protein sequence | MASSLIPPAS EPVAGLPVLS HIRKDFIWGV STASFQIEGA ANEDGRGQSI WDVYCRSGYV
ANNDTGDVAC DHYHRYQEDV ALMKTLGIQA YRFSIAWPRI FPQGTGAINE PGLAFYDRLI
DALEAAGIEP WICLYHWDLP QAMEERGGWM NRDIVGWFAD YARVIGERYG KRVKRFATFN
EPGIFSLFSR SFGARDRSAD EKLHRWIHHV NLAHGAAVDV LRETVADAKI GLVTNYQPVY
PSSDKPEDVA EAKLISDYWN RAFADPQYRG EYPGLIRDAV KPYIQPGDME RIHRPLDWFG
LNHYSPVYIN SDPNAIVGLG WGPKPEGIPR SPIDWTIEPD AFRDTLIEIS RRYGKPVYVT
ENGYGSNIEK PDANGEVVDP GRIGFLRDYI TALDQAVAAG ADVRGYMVWS LLDNFEWESG
YSVRFGLIYI DYATLRRIPK ASFKWFADVI RHARGASA
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