Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_1869 |
Symbol | |
ID | 6409528 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 2006587 |
End bp | 2008938 |
Gene Length | 2352 bp |
Protein Length | 783 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642711757 |
Product | putative phosphoketolase |
Protein accession | YP_001990870 |
Protein GI | 192290265 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3957] Phosphoketolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCGACG TGTTGTCCAA CGATCTGTTG CAGAAGATGG ACGCCTATTG GCGCGCCGCG AACTACCTGT CTGTCGGACA GATCTATCTG CAGGACAATC CGCTACTCGA TCAGAAGCTG CAACTCGACC ACATCAAGCC GCGCCTGCTT GGCCACTGGG GTACGACCCC CGGCCTCAAT CTTCTCTACG TGCATCTCAA CCGGCTGATC ACCGAGCATG ATCTCGATAT GATCTACATT ACCGGTCCCG GCCATGGCGG GCCCGGCCTG GTTGCCAACG CGTATCTGGA AGGCACCTAC ACCGAGCGCT ATCCGGCGAT CGAGCGCAGC CGCAACGGCA TGCAGCGGCT GTTCCGACAA TTCTCGTGGC CGCACGGCGT GCCGAGCCAC GTCTCGCCGG AAACGCCCGG CTCGATCCAC GAGGGCGGCG AACTCGGCTA CTCGCTGGCG CATGCCTATG GCGCGGCGTT CGACAATCCG AATCTGATCG TCGCTTGCGT GGTCGGCGAC GGCGAGGCCG AGACCGGCGC TCTGGCGACG AGTTGGCACT CCAACAAGTT TCTCAATCCC GCGCGCGACG GCGCGGTGTT GCCGATCCTG CATCTGAACG GCTTCAAGAT CGCCAACCCG ACCGTGCTGG CGCGGATCAC GCCGCAGGAA CTCACCGACC TGATGCGCGG CTATGGCTAT GAGCCGCACT TCGTCGAAGG CGACGATCCG GCGGTGGTGC ACCAGACGCT GGCTGCGACG CTGGAACGCG TGCTCGGCGA GATCCGGGCC ATTCAGGACA AGGCTCGCAA CCACGGCGAC ACCGAGCGGC CGCGCTGGCC GATGATCGTG ATGCGGACCC CAAAGGGGTG GACCGGCCCC AAGCAGGTCG ACGGCAAGCC GGTGGAGGGC ACCTGGCGCG CCCATCAGGT GCCGATCGCG GACTTCAAGA ACCCCGAGCA TCTGACGCTG CTCGAAGATT GGATGCGCAG CTATCGGCCC GATGAGCTGT TCGACGCCAC CGGCAAGCTG CGCGACGAGC TGCAGGCGCT GGCGCCGACC GGCCGTCGCC GGATGAGCGC CAATCCGCAC GCCAATGGCG GCGAATTGCT GGAGCCGCTG TCGCTGCCCG ATTTCCACGA CTATGCGGTG ACGCTCACCG GGCCCGGCGC GCTGAAGGCC GAGGCGACGC GGGTGCTCGG CACGTTCCTG CGCGACGTGA TGAAGAACAG CCTCGAGAGC GAAAACTTCC GCTTGTTCGG CCCGGACGAA ACCGCCTCGA ACCGGCTCGA TGCGGTGCTG CAAGTCTCGC CGAAGGAGTG GATGGCGGCG ATCGAGGATG TCGACGTCGA TCTCAGTCCG GACGGCCGGG TGATGGAGGT GCTCAGCGAG CATCTATGCC AAGGCTGGCT CGAAGGCTAT CTGCTGACCG GCCGCCACGG CTTCTTCTCG TGCTACGAGG CGTTCATCCA CATCATCGAC TCGATGTTCA ATCAGCACGC CAAATGGCTA AAGGCGTGCG CCACGATTCC GTGGCGGAAG CCGATCGCGT CGCTGAACTA TCTGCTGACC TCGCACGTCT GGCGCCAAGA TCACAACGGG TTCTCGCACC AGGATCCCGG CTTCATCGAC CACGTCGCCA ACAAGAAGTC GAATGTGGTG CGGATCTATC TGCCGCCGGA TGCCAACTGT CTGCTGTCGG TGGCCGACCA CTGCCTGCGC AGCCGCAACT ACGTCAACCT GATCGTCGCC GGCAAGCAGC CGGAATGGCA GTGGCTCGAT ATCGACGCCG CCGTCCGTCA CTGCACCACA GGCGCCGGGA TCTGGCATTG GGCGAGCGAC GAGGGTGAGC CCGACGTGGT GATGGCCTGC GCCGGCGACG TGCCGACGGT CGAGACGCTG GCGGCGGTCA AGCTGCTGCG GGAGTACGTG CCGGACATCA AGATCCGTGT CGTCAACGTG GTCGACCTGA TGGTGCTGCA GCCGAGCTCC GAGCATCCGC ACGGCCTGGA CGACCGCCGC TTCGACGAGC TGTTCACCAC CGACAAGCCG GTGATCTTCG CCTTCCACGG CTATCCGTGG CTGATCCACC GGCTGACCTA TCGCCGCCGC AACCACGTCA ACATCCACGT CCGCGGCTAC AAGGAAGAGG GCACCACCAC CACGCCGTTC GACATGGTGG TGCTGAACGA TCTCGACCGT TATCGCCTGG CACTCGACGC CATCCTGCGG ATTCCGCGGC TCGCCGATCA GCGCGATGCC GCCACCTCGC GCTACTGGGC GACGATGCAG CGGCACAAGC TGTATATCGG CGAACACGGC GACGATCTGC CAGAGGTTCG CGACTGGCGC TGGTCGGCCT GA
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Protein sequence | MPDVLSNDLL QKMDAYWRAA NYLSVGQIYL QDNPLLDQKL QLDHIKPRLL GHWGTTPGLN LLYVHLNRLI TEHDLDMIYI TGPGHGGPGL VANAYLEGTY TERYPAIERS RNGMQRLFRQ FSWPHGVPSH VSPETPGSIH EGGELGYSLA HAYGAAFDNP NLIVACVVGD GEAETGALAT SWHSNKFLNP ARDGAVLPIL HLNGFKIANP TVLARITPQE LTDLMRGYGY EPHFVEGDDP AVVHQTLAAT LERVLGEIRA IQDKARNHGD TERPRWPMIV MRTPKGWTGP KQVDGKPVEG TWRAHQVPIA DFKNPEHLTL LEDWMRSYRP DELFDATGKL RDELQALAPT GRRRMSANPH ANGGELLEPL SLPDFHDYAV TLTGPGALKA EATRVLGTFL RDVMKNSLES ENFRLFGPDE TASNRLDAVL QVSPKEWMAA IEDVDVDLSP DGRVMEVLSE HLCQGWLEGY LLTGRHGFFS CYEAFIHIID SMFNQHAKWL KACATIPWRK PIASLNYLLT SHVWRQDHNG FSHQDPGFID HVANKKSNVV RIYLPPDANC LLSVADHCLR SRNYVNLIVA GKQPEWQWLD IDAAVRHCTT GAGIWHWASD EGEPDVVMAC AGDVPTVETL AAVKLLREYV PDIKIRVVNV VDLMVLQPSS EHPHGLDDRR FDELFTTDKP VIFAFHGYPW LIHRLTYRRR NHVNIHVRGY KEEGTTTTPF DMVVLNDLDR YRLALDAILR IPRLADQRDA ATSRYWATMQ RHKLYIGEHG DDLPEVRDWR WSA
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