Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_1864 |
Symbol | |
ID | 6409523 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 2000824 |
End bp | 2002521 |
Gene Length | 1698 bp |
Protein Length | 565 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642711752 |
Product | magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase |
Protein accession | YP_001990865 |
Protein GI | 192290260 |
COG category | [C] Energy production and conversion |
COG ID | [COG1032] Fe-S oxidoreductase |
TIGRFAM ID | [TIGR02026] magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.599667 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCGCATCC TTCTCATTCA CCCGAATTAT CATTCCGGTG GCGCGGAGAT CGCCGGCCAC TGGCCGCCGG CATGGGCCCC CTATCTGGCA GGCGCGCTGA AGGCGAACGG ATTCGCCGAC ATCAAATTCG TCGATGCGAT GACCGAGGAG ATCTCCAACG AAGGTCTCGC CAAGATCATC TCCGACTATC AGCCCGACCT GGTCGGCGCC ACATCGATCA CCCCCTCGAT CTACGCGGCC GAAGAAGCAC TGAAGGTCGC CAAGCAGGTC AACCCGAAGA TCGTCACCAT GCTGGGCGGC GTGCATGCGA CCTTCATGTA TCAGCAGGTG CTGAGCGAAG CGCCGTGGGT CGACGTGATC GTCCGCGGCG AAGGCGAAGA GATCGTCGTC GAGCTGGCGC GCGCCGTTGC CTCGGGCAAC TGGCCGGCGA ACCGCTCCGA GATCAAGGGC CTCGCCTACA CCGAAGGCTC CAACGGCGAG AGCCAGATCG TCGCCACCGC GGCGGCTCCG ACGGTCAAGG ACCTCGACGC CATCAAGCCG GACTGGGGCG TACTAAACTG GAATCTGTAT CGCTACATTC CGATGAACAC CCGCGTGGCG ATCCCGAACA TGGCGCGCGG CTGTCCGTTC ACCTGTTCGT TCTGCTCGCA GTGGAAATTC TGGCGCGACT ACCGCGTCCG CGATCCGAAG AAGGTGGTCG ACGAGATCCA GGAGCTGGTC GAGAAGTATG ACGTCGGCTT CTTCATCCTC GCCGACGAAG AACCCACCAT CAACCGCAAG AAGTTCATCC AGTTCTGCGA AGAGCTGATC GCTCGCGGCC TGAACAAGAA GGTGCAGTGG GGCATCAACA CCCGCGTCAC CGACATCCTG CGCGACGAGC AGCTGCTGAA ATTCTACAAC GAAGCCGGCC TGATGCACGT CTCGCTCGGC ACCGAAGCGG CGGCTCAGCT CAAGCTCGAC CTGTTCAACA AGGAGACCAA GATCTCCGAC AACAAGAAGG CGATCCGCCT GCTCCGCGAA GCCGGCATCG TCGTCGAAGC CCAGTTCATC GTCGGCCTCG ACTCCGAGAC CCCGGAGACG CTGGAAGAAA CCTACCGCAT GGCGATGGAC TGGAAGCCGG ACCTCGCCAA CTGGTCGATG TACACCCCGT GGCCGTTCAC ACCGCTGTTC AAGGAACTGT CCGACAAGGT CGAGGTGTTC GACTTCGCCA AGTACAACTT CGTCACGCCG ATCGTGAAGC CGGCGGCGAT GGAGCGCGGC GAACTGCTCG ACCGGGTGAT GAACAACTAT CGCCGCTTCT ACATGTACAA GGCGTTCTTC TCGTATCCCT GGTCGGGAAC GGGACGCCGG CGTCGCTACC TGCTGGGCTG CCTGAAGGCG TTCCTCAAGG CCGGCTTCGA GCGCAAGTTC TACGACCTCG GCCGCGTCGG CTATTGGGGT CCGCAGTCGA AGAAGAAGGT CGACTTCCAG TTCGACACCA CCCGCAAGAT CTCGCACGCG CAGATGGCGG ACTGGGAAGC CAACGCCGAC CGCTCCCGCA AGGCCGCCGC CTCTCAGATG GCGATCGTCT CGGCCTGCGG CGGTGGTACC GATCAGATGG AAGAGAGCGA AGCCGATGCC AAGGCGGCGC TCGCCAAGAC CGTAACCAGC CGCGTGGCGG ACAGCACCCA TGACGCAGGT TCGGTCACCC GTCACTGA
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Protein sequence | MRILLIHPNY HSGGAEIAGH WPPAWAPYLA GALKANGFAD IKFVDAMTEE ISNEGLAKII SDYQPDLVGA TSITPSIYAA EEALKVAKQV NPKIVTMLGG VHATFMYQQV LSEAPWVDVI VRGEGEEIVV ELARAVASGN WPANRSEIKG LAYTEGSNGE SQIVATAAAP TVKDLDAIKP DWGVLNWNLY RYIPMNTRVA IPNMARGCPF TCSFCSQWKF WRDYRVRDPK KVVDEIQELV EKYDVGFFIL ADEEPTINRK KFIQFCEELI ARGLNKKVQW GINTRVTDIL RDEQLLKFYN EAGLMHVSLG TEAAAQLKLD LFNKETKISD NKKAIRLLRE AGIVVEAQFI VGLDSETPET LEETYRMAMD WKPDLANWSM YTPWPFTPLF KELSDKVEVF DFAKYNFVTP IVKPAAMERG ELLDRVMNNY RRFYMYKAFF SYPWSGTGRR RRYLLGCLKA FLKAGFERKF YDLGRVGYWG PQSKKKVDFQ FDTTRKISHA QMADWEANAD RSRKAAASQM AIVSACGGGT DQMEESEADA KAALAKTVTS RVADSTHDAG SVTRH
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